Materials and presentation for the 2022 ISB Microbiome course.
☆27Jun 13, 2024Updated last year
Alternatives and similar repositories for isb_course_2022
Users that are interested in isb_course_2022 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Teaching materials for SymbNET course: from MAGs to GEMs☆14Jan 8, 2024Updated 2 years ago
- ☆19Dec 6, 2022Updated 3 years ago
- Python package to study microbial communities using metabolic modeling.☆124Mar 31, 2026Updated 2 weeks ago
- Code, scripts, some logs and general misc. from to the RNA viruses in MetaTranscriptome discovery project.☆12Jan 5, 2023Updated 3 years ago
- Metagenomic Intra-Species Diversity Analysis (MIDAS)☆42Sep 3, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Various customs functions written to enhance the base functions of phyloseq. Most of them are used in the formation "Métagénomique 16S" p…☆33Oct 29, 2025Updated 5 months ago
- EnDED is a program that aims to detect environmentally-driven ("indirect") edges in an association network.☆10Dec 1, 2023Updated 2 years ago
- ☆12Oct 3, 2023Updated 2 years ago
- Website☆16Aug 30, 2025Updated 7 months ago
- MICROPHERRET: MICRObial PHEnotypic tRait ClassifieR using machine lEarning Techniques☆12Dec 16, 2025Updated 3 months ago
- autoprot provides standardised, fast, and reliable proteomics data analysis while ensuring a high customisability needed to tailor the an…☆10Apr 3, 2026Updated last week
- microbiome data simulation package☆22Oct 2, 2025Updated 6 months ago
- An R package to produce full spectrum flow cytometry plots outside the acquisition software.☆11May 9, 2023Updated 2 years ago
- ☆41Oct 10, 2025Updated 6 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- taxonomic classes for Python☆11Aug 30, 2021Updated 4 years ago
- ☆27May 20, 2023Updated 2 years ago
- Supplementary data for co-occurrence manuscript☆10Dec 19, 2019Updated 6 years ago
- an R package to biotype a community☆14Oct 19, 2021Updated 4 years ago
- Materials and tutorials for the 2020 ISB Microbiome Course☆31Nov 10, 2022Updated 3 years ago
- R package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.☆25Jan 24, 2024Updated 2 years ago
- exploratory and interactive microbiome analyses based on heatmaps☆27Jan 27, 2025Updated last year
- PoGo is a proteogenomic tool which allows mapping of peptides identified through mass spectrometry to a reference genome through provided…☆12Jul 8, 2021Updated 4 years ago
- Climate change is a controversial topic of debate, where many of us do not believe in anthropogenic climate change. Because its consequen…☆12Sep 20, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Python interface for running COMETS simulations and analyzing the results☆16Feb 24, 2026Updated last month
- Distributed dynamic process model (DDPM) is a bidirectional coupling eco-hydrological model for (but not limited to) steppe inland river …☆10Jul 9, 2025Updated 9 months ago
- MIMIX: a Bayesian Mixed-Effects Model for Microbiome Data from Designed Experiments☆11Jul 9, 2020Updated 5 years ago
- ☆47Jun 11, 2025Updated 10 months ago
- TUI for browsing, canceling, and inspecting SLURM jobs☆13Nov 13, 2023Updated 2 years ago
- ☆64Mar 13, 2026Updated last month
- Linux programming environment course in Chinese☆12Nov 19, 2017Updated 8 years ago
- Generates a set of plots showing ubiome data over time.☆13May 12, 2019Updated 6 years ago
- Pipeline for searching and aligning contact maps for proteins, then running DeepFri's GCN.☆44Mar 20, 2026Updated 3 weeks ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Generate Galaxy tool descriptions automatically from QIIME 2 actions.☆20Updated this week
- GPRuler, an open-source computational framework to automate the reconstruction process of Gene-Protein-Reaction (GPR) rules within metabo…☆11Oct 11, 2022Updated 3 years ago
- ☆11Jun 26, 2020Updated 5 years ago
- Coupled model of plant nitrogen demand and rhizosphere carbon allocation (FUN) and soil SOM cycling (CORPSE)☆10May 24, 2017Updated 8 years ago
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigs☆33Aug 22, 2024Updated last year
- Pipelines used in the lab.☆15Mar 26, 2025Updated last year
- A public resource for microbiome bioinformatics benchmarking using artificially constructed (i.e., mock) communities.☆83May 14, 2019Updated 6 years ago