guiwitz / napari-convpaintLinks
Segment images utilizing pre-trained neural networks as feature extractors
☆40Updated 2 weeks ago
Alternatives and similar repositories for napari-convpaint
Users that are interested in napari-convpaint are comparing it to the libraries listed below
Sorting:
- A minimal dependency napari plugin giving access to scikit-image functions☆18Updated last month
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Updated 2 weeks ago
- ☆15Updated 2 months ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆16Updated 5 months ago
- Spotiflow plugin for napari☆13Updated 2 weeks ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆29Updated 5 months ago
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.☆16Updated 2 years ago
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- dask empowered fast4dreg☆14Updated 10 months ago
- ☆51Updated 5 months ago
- A napari plugin to view and edit metadata☆10Updated 2 years ago
- Course on Deep Learning for imaging using PyTorch☆13Updated 3 years ago
- 1d plotting in napari-based canvas.☆26Updated this week
- ☆11Updated last month
- Use Napari Viewer to display CZI images☆12Updated 3 years ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆18Updated 5 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆84Updated 2 weeks ago
- Ngio is a Python library to streamline OME-Zarr image analysis workflows.☆24Updated this week
- Browse your OMERO database from within napari.☆39Updated last week
- Particle tracking by solving linear assignment problem.☆57Updated last week
- ☆37Updated last month
- A napari plugin for making image annotation using feature space of vision transformers and Random Forest classifier☆20Updated 3 weeks ago
- A template repo used to make new napari plugins☆27Updated last week
- "Defragmentation TS2: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: work…☆10Updated 2 years ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated last year
- ☆40Updated this week
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆16Updated 3 months ago
- This repository provides a collection of tools to simplify reading CZI (Carl Zeiss Image) pixel and metadata in Python. In addition it al…☆15Updated last month
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- napari plugin for trackastra☆17Updated this week