esgomezm / microscopy-dl-suite-tfLinks
Deep Learning segmentation suite designed for 2D microscopy image segmentation
☆10Updated 4 years ago
Alternatives and similar repositories for microscopy-dl-suite-tf
Users that are interested in microscopy-dl-suite-tf are comparing it to the libraries listed below
Sorting:
- some useful function to get Label from ROIs and vice versa , and more!☆11Updated 2 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆59Updated 5 months ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 4 years ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 8 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆25Updated 3 weeks ago
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Updated 2 years ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆17Updated 3 weeks ago
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆17Updated last month
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 4 years ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆55Updated 7 months ago
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Updated 3 weeks ago
- python tools for BigDataViewer☆22Updated 11 months ago
- ☆13Updated 5 years ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 7 months ago
- A Python module for accessing Hamamatsu DCIMG files☆14Updated 2 years ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 8 months ago
- MultiModal Big Image Data Sharing and Exploration☆18Updated 2 years ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆25Updated last month
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated 3 weeks ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- The repository of NEUBIAS textbook 2021☆11Updated 3 years ago
- ☆15Updated 3 years ago
- ☆12Updated 3 months ago
- MiC is an ImageJ plugin to compare segmentation masks☆19Updated 6 months ago
- Process and analyze surfaces using vedo in napari.☆25Updated last year
- A napari plugin to analysis point spread functions.☆13Updated 8 months ago
- ☆10Updated last year
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆27Updated 10 months ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆45Updated 7 months ago
- Process images using SimpleITK in napari☆23Updated 7 months ago