manzt / simple-zarr-server
serve Zarr datasets via HTTP
☆28Updated last year
Alternatives and similar repositories for simple-zarr-server:
Users that are interested in simple-zarr-server are comparing it to the libraries listed below
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆42Updated 2 months ago
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 3 years ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆22Updated last month
- A minimal Python package for reading OME-Zarr (meta)data☆25Updated 3 weeks ago
- ☆17Updated last week
- scalable multiscale image pyramids in python☆27Updated 9 months ago
- Pydantic models for OME-NGFF☆23Updated last week
- Experimental micro-service for implementing the Zarr spec over HTTP☆18Updated last month
- A minimal Zarr image viewer based on Viv.☆148Updated this week
- A napari plugin for zarr backed OME-NGFF images☆33Updated last month
- Fusing image tiles with dask array's map_blocks☆30Updated last year
- Interface to the Bioformats Java library☆13Updated 3 months ago
- A 3D interactivity toolbox for napari☆34Updated 2 weeks ago
- Python project containing Ice remoting code for OMERO☆23Updated 3 weeks ago
- GIve easy, high-level access to ome-zarr fileset☆14Updated this week
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆27Updated 11 months ago
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆19Updated 3 weeks ago
- native Python dataclasses for the OME data model☆56Updated 2 weeks ago
- A multi-dimensional spatial image data structure for scientific Python.☆39Updated 2 weeks ago
- A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.☆34Updated this week
- Create web-based OME-Zarr galleries☆17Updated this week
- Command-line client for Fractal☆45Updated last week
- Python module for registering and fusing multi-view microscopy data☆23Updated last month
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆35Updated last week
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆70Updated last week
- GPU-accelerated Image Processing library for Python☆40Updated last week
- BIOMERO - A python library for easy connecting between OMERO (jobs) and a Slurm cluster☆16Updated last month
- ☆12Updated 8 months ago
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆132Updated last month
- ☆34Updated last week