Alternatives and similar repositories for fractal-tasks-core

Users that are interested in fractal-tasks-core are comparing it to the libraries listed below

• BioVisionCenter / ngio
  Ngio is a Python library to streamline OME-Zarr image analysis workflows.
  ☆32Updated this week
• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆42Updated last week
• fractal-analytics-platform / fractal-client
  Command-line client for Fractal
  ☆47Updated last week
• tlambert03 / ome-types
  native Python dataclasses for the OME data model
  ☆64Updated last week
• fideus-labs / ngff-zarr
  A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.
  ☆55Updated last week
• krentzd / napari-clemreg
  An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)
  ☆19Updated last month
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆95Updated this week
• bioimage-io / core-bioimage-io-python
  Python libraries for loading, running and packaging bioimage.io models
  ☆34Updated last week
• TheJacksonLaboratory / ezomero
  A module with convenience functions for writing Python code that interacts with OMERO.
  ☆46Updated last week
• Euro-BioImaging / BatchConvert
  A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…
  ☆24Updated 8 months ago
• tlambert03 / napari-omero
  Browse your OMERO database from within napari.
  ☆39Updated this week
• bioio-devs / bioio
  Image reading, metadata management, and image writing for Microscopy images in Python
  ☆109Updated this week
• rosalindfranklininstitute / RedLionfish
  ☆36Updated last year
• AllenCellModeling / napari-aicsimageio
  Multiple file format reading directly into napari using pure Python
  ☆39Updated last month
• ome-zarr-models / ome-zarr-models-py
  A minimal Python package for reading, writing and validating OME-Zarr (meta)data
  ☆36Updated 2 weeks ago
• haesleinhuepf / napari-assistant
  ☆33Updated 7 months ago
• COSC-Lab / napari-fast4dreg
  dask empowered fast4dreg
  ☆15Updated last year
• spatial-image / multiscale-spatial-image
  Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.
  ☆54Updated 3 weeks ago
• fmicompbio / ez_zarr
  GIve easy, high-level access to ome-zarr fileset
  ☆22Updated 2 months ago
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆25Updated last year
• BiAPoL / napari-clusters-plotter
  A napari plugin for clustering objects according to their properties.
  ☆87Updated last week
• haesleinhuepf / devbio-napari
  ☆51Updated 7 months ago
• jluethi / napari-feature-visualization
  Visualizing feature measurements on label images in napari
  ☆10Updated last year
• fractal-napari-plugins-collection / napari-feature-classifier
  ☆22Updated 5 months ago
• JaneliaSciComp / pydantic-ome-ngff
  Pydantic models for OME-NGFF
  ☆24Updated 2 months ago
• haesleinhuepf / napari-skimage-regionprops
  Feature extraction for labeled objects in images using regionprops from scikit-image
  ☆52Updated 7 months ago
• AnniekStok / napari-segmentation-toolbox
  A basis for a napari plugin for manually correcting cell segmentation in 3D (z, y, x) or 4D (t, z, y, x) (virtual) arrays.
  ☆10Updated this week
• lukasz-migas / napari-plot
  1d plotting in napari-based canvas.
  ☆25Updated last week
• czbiohub-sf / iohub
  Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata
  ☆44Updated this week
• clEsperanto / pyclesperanto
  GPU-accelerated Image Processing library for Python
  ☆52Updated last week