elolab / multisubjectDSanalysisLinks
☆17Updated 3 years ago
Alternatives and similar repositories for multisubjectDSanalysis
Users that are interested in multisubjectDSanalysis are comparing it to the libraries listed below
Sorting:
- Perform differential expression analysis on multi-sample single cell datasets using linear mixed models☆28Updated 2 months ago
- A re-analysis of the [Single-cell transcriptomic analysis of Alzheimer’s disease](https://www.nature.com/articles/s41586-019-1195-2) usin…☆14Updated 2 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆40Updated 4 years ago
- 10x snRNA-seq study on 5 postmortem human brain regions across the reward circuitry: NAc, AMY, sACC, DLPFC, and HPC☆25Updated 3 years ago
- ☆26Updated 7 months ago
- Bead-based single-cell atac processing☆33Updated 4 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- Wrapper and helper functions to use bulk RNA-seq differential expression methods with single-cell data☆21Updated last year
- An r package that works as a wrapper to homologene☆47Updated 2 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated last year
- ☆27Updated 3 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆47Updated 2 years ago
- An R package to analyze single-cell V(D)J data☆28Updated 2 years ago
- An R package designed to demultiplex cell hashing data☆31Updated 3 weeks ago
- Clone of the Bioconductor repository for the batchelor package.☆18Updated 9 months ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆44Updated 3 years ago
- Cluster Identity Predictor (R package implementation)☆21Updated 3 years ago
- Exon-Intron Split Analysis (EISA) in R☆17Updated last month
- ☆43Updated 4 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆21Updated 2 years ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆38Updated 3 years ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆38Updated last month
- ☆55Updated 5 years ago
- R package for robust clustering of single cell RNA sequencing data☆36Updated last year
- R package for Flexible dot plots☆29Updated 3 years ago
- ☆12Updated last year
- repo to explore spatial data in R/Bioconductor and Python☆12Updated 6 years ago
- An R-based interface for loom files☆67Updated 5 years ago
- GLASS consortium☆14Updated 3 years ago
- Single-cell Case Control Analysis☆52Updated last week