dynverse / dynguidelinesLinks
Selecting the optimal trajectory inference based on a given dataset and user input ๐ฎ
โ19Updated 5 years ago
Alternatives and similar repositories for dynguidelines
Users that are interested in dynguidelines are comparing it to the libraries listed below
Sorting:
- R package for specialised analysis of single cell dataโ40Updated 3 years ago
- Data and code for the paper "Developmental diversification of cortical inhibitory interneurons"โ24Updated 7 years ago
- โ43Updated 5 years ago
- Single Cell Epigenome-based Inference of Activityโ19Updated 2 years ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-โฆโ56Updated 7 months ago
- Explore and share your scRNAseq clustering resultsโ50Updated 2 years ago
- Hierarchical classification of cellsโ28Updated last year
- Statistical approach for removing unwanted variation from multiple single-cell datasetsโ70Updated last year
- post-clustering differential expression testโ36Updated 6 years ago
- Single-Cell Sequencing Quality Control and Processing Softwareโ30Updated 6 years ago
- Overview of the scripts used to analyse the brainimmuneatlas dataโ19Updated 5 years ago
- โ31Updated 3 years ago
- Quasilinear data representations for single-cell omics data analysisโ43Updated 2 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolutionโ47Updated 2 years ago
- CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seqโ23Updated last year
- An r package that works as a wrapper to homologeneโ49Updated 2 years ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batchโฆโ39Updated 4 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.โ22Updated 6 years ago
- Mosaic single cell data integration using non-overlapping featuresโ37Updated 3 years ago
- An analytics package for single cell dataโ22Updated 3 years ago
- โ48Updated 7 years ago
- Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics andโฆโ39Updated 2 years ago
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developingโฆโ25Updated 5 years ago
- Clone of the Bioconductor repository for the scran package.โ46Updated last year
- Dynamic models for single-cell RNA-seq time series.โ40Updated 7 years ago
- This repository contains HCA Benchmarking codesโ26Updated 6 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithmโ44Updated last year
- Analysis pipeline for the adolescent mouse nervous system projectโ24Updated 7 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. This is a novel R package of the RaceID3 and Sโฆโ44Updated last year
- โ56Updated 5 years ago