tgirke / systemPipeRLinks
Project Website:
☆54Updated 6 months ago
Alternatives and similar repositories for systemPipeR
Users that are interested in systemPipeR are comparing it to the libraries listed below
Sorting:
- Representation and manipulation of genomic intervals☆46Updated 3 weeks ago
- Glimma R package☆50Updated last year
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated last week
- An htmlwidget version of igv, for RStudio and Shiny apps☆38Updated 3 months ago
- A container (S4 class) for matrix-like assays☆37Updated last month
- Bioconductor package for management of multi-assay data☆74Updated last month
- Explore design matrices interactively with R/Shiny☆38Updated 2 months ago
- The START App: R Shiny Transcriptome Analysis Resource Tool☆88Updated 5 years ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 5 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- Devel repository for minfi☆64Updated last year
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- Transcript quantification import with automatic metadata detection☆67Updated last week
- Genome Interval Arithmetic in R☆94Updated 2 weeks ago
- fastqcr: Quality Control of Sequencing Data☆76Updated 2 years ago
- R package wrapping bedtools☆44Updated 9 months ago
- Brings SummarizedExperiment to the tidyverse☆29Updated last week
- A tidy interface for coverage analysis☆31Updated 5 years ago
- Bioconductor package that makes BIG data pint-sized.☆21Updated last year
- Reactome Pathway Analysis☆43Updated last week
- Grid and ggplot2 based visualization for biological data☆115Updated 2 months ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆79Updated 3 weeks ago
- 2018 Bioconductor Workshops☆76Updated 6 years ago
- MSigDB gene sets for multiple organisms in a tidy data format☆84Updated 5 months ago
- Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data☆15Updated 7 years ago
- DESeq2 or edgeR☆22Updated 9 years ago
- Best practice RNA-Seq analysis pipeline for reference-based RNA-Seq analysis☆40Updated 4 years ago
- pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data☆56Updated 2 weeks ago
- An R Package for Geneset Enrichment Workflows☆76Updated 2 weeks ago
- An R for fast and flexible DNA methylation analysis☆35Updated 3 weeks ago