ncats / public_sequinLinks
public production version of sequin to share with the public
☆11Updated 7 months ago
Alternatives and similar repositories for public_sequin
Users that are interested in public_sequin are comparing it to the libraries listed below
Sorting:
- HSCI/Catalyst Single-cell RNA-Seq Workshop☆19Updated 6 years ago
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆10Updated 3 years ago
- Explore and download data from the recount3 project☆36Updated 2 months ago
- An open, collaborative project to analyze data from the Single-cell Pediatric Cancer Atlas (ScPCA) Portal☆14Updated last week
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆28Updated 3 years ago
- Fine-mapping pipeline for Open Targets Genetics☆26Updated 2 years ago
- R package for Flexible dot plots☆29Updated 3 years ago
- Identify and correct invalid gene symbols☆58Updated 8 months ago
- ☆62Updated 4 months ago
- A Snakemake pipeline for cellranger to process 10x single-cell RNAseq data☆16Updated 5 years ago
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆19Updated 3 months ago
- Clone of the Bioconductor repository for the batchelor package.☆17Updated 4 months ago
- ☆35Updated 5 months ago
- Cell type matching in single-cell RNA-sequencing data using FR-Match☆19Updated 4 months ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- R package (compatible with SCope) to create generic .loom files and extend them with other data e.g.: SCENIC regulons, Seurat clusters an…☆42Updated 3 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 5 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆56Updated last year
- Example scripts for analyzing CUT&RUN datasets☆13Updated 6 years ago
- R/Bioconductor package for working with 10x scATACseq data☆40Updated last year
- Single-cell Scalable Visualization and Analytics☆26Updated 6 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- Explore the cancer relevance of your gene list☆51Updated 5 months ago
- An r package that works as a wrapper to homologene☆46Updated last year
- (aka sc-atlasing-toolbox) Pipeline framework for iteratively and reproducibly building and evaluating single cell atlases☆37Updated last week
- ScaleSC: A superfast and scalable single cell RNA-seq data analysis pipeline powered by GPU. https://doi.org/10.1093/bioadv/vbaf167☆32Updated last month
- ☆55Updated 5 months ago
- ☆24Updated 2 months ago
- Algorithms for single-cell analysis☆29Updated 4 years ago
- This is the ensembldb development repository.☆35Updated 11 months ago