bjmt / universalmotif
Motif manipulation functions for R.
☆28Updated 3 months ago
Alternatives and similar repositories for universalmotif:
Users that are interested in universalmotif are comparing it to the libraries listed below
- R package wrapping bedtools☆38Updated last week
- documentation for trackViewer☆29Updated 5 years ago
- Scripts to import your FeatureCounts output into DEXSeq☆33Updated 6 years ago
- Filtering of PDX samples for mouse derived reads☆26Updated 2 years ago
- Snakemake pipeline for running MAJIQ☆19Updated last year
- binned motif enrichment analysis and visualisation☆40Updated this week
- CLIP-seq Analysis of Multi-mapped reads☆29Updated 3 years ago
- ☆23Updated 3 years ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated last year
- Detecting intron retention from RNA-Seq experiments☆54Updated 7 months ago
- Detection of differential translated genes using Ribo-seq☆15Updated 3 years ago
- Differential ATAC-seq toolkit☆27Updated last year
- SPP - R package for analysis of ChIP-seq and other functional sequencing data☆42Updated 3 years ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 2 years ago
- A Spike-in Free ChIP-Seq Normalization Approach for Detecting Global Changes in Histone Modifications☆31Updated 3 years ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆86Updated 6 months ago
- An R interface to the MEME Suite☆49Updated 4 months ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- An R package to process and analyze transcriptomic data☆16Updated 5 months ago
- Summer school course materials collection☆25Updated 6 years ago
- Arabidopsis RNA_-seq downstream analysis shiny app☆31Updated 5 years ago
- RNA editing tests☆16Updated 4 years ago
- ☆36Updated 2 years ago
- ☆9Updated 4 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆36Updated 2 months ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆26Updated 6 months ago
- Software to compute reproducibility and quality scores for Hi-C data☆46Updated 5 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆55Updated 2 weeks ago
- RNA-seq workflow: differential transcript usage☆20Updated last year
- Tutorial Website☆56Updated 4 years ago