bjmt / universalmotifLinks
Motif manipulation functions for R.
☆30Updated last month
Alternatives and similar repositories for universalmotif
Users that are interested in universalmotif are comparing it to the libraries listed below
Sorting:
- An R interface to the MEME Suite☆53Updated 5 months ago
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆74Updated 2 weeks ago
- R package wrapping bedtools☆44Updated 8 months ago
- Scripts to import your FeatureCounts output into DEXSeq☆34Updated 7 years ago
- Extract Sequence from Genome According to Annotation File☆38Updated 7 months ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆93Updated 2 weeks ago
- binned motif enrichment analysis and visualisation☆43Updated 3 weeks ago
- Detecting intron retention from RNA-Seq experiments☆55Updated last year
- ☆34Updated this week
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆50Updated last month
- ☆41Updated 3 years ago
- Tutorial Website☆60Updated 4 years ago
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- documentation for trackViewer☆29Updated 6 years ago
- A whole genome bisulfite sequencing (WGBS) pipeline for the alignment and QC of DNA methylation that goes from from raw reads (FastQ) to …☆23Updated 3 years ago
- Arabidopsis RNA_-seq downstream analysis shiny app☆30Updated 6 years ago
- A pipeline for differential expression and differential alternative splicing analysis☆66Updated last year
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆37Updated 4 years ago
- Process m6A/MeRIP-seq data in a single or batch job mode☆20Updated 5 years ago
- Estimation of Promoter Activity from RNA-Seq data☆56Updated 4 months ago
- A Spike-in Free ChIP-Seq Normalization Approach for Detecting Global Changes in Histone Modifications☆34Updated 3 years ago
- 🧬 Gene analysis toolkit based on R☆59Updated 10 months ago
- SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA☆14Updated 7 years ago
- Merge fastq files split over lanes☆20Updated 7 years ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- ☆23Updated 8 months ago
- An R package for time course sequencing data analysis☆20Updated 2 years ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 3 years ago
- Workshop • Analysis of RNA-seq data☆37Updated last year
- ☆23Updated 4 years ago