bjmt / universalmotifLinks
Motif manipulation functions for R.
☆30Updated 4 months ago
Alternatives and similar repositories for universalmotif
Users that are interested in universalmotif are comparing it to the libraries listed below
Sorting:
- An R interface to the MEME Suite☆52Updated 3 months ago
- documentation for trackViewer☆29Updated 6 years ago
- Tutorial Website☆59Updated 4 years ago
- R package wrapping bedtools☆43Updated 6 months ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆90Updated 6 months ago
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆74Updated 3 months ago
- Scripts to import your FeatureCounts output into DEXSeq☆34Updated 6 years ago
- ☆39Updated 3 years ago
- Detecting intron retention from RNA-Seq experiments☆55Updated last year
- binned motif enrichment analysis and visualisation☆41Updated last week
- Process m6A/MeRIP-seq data in a single or batch job mode☆20Updated 5 years ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- Demultiplexes a fastq.☆47Updated 4 years ago
- A whole genome bisulfite sequencing (WGBS) pipeline for the alignment and QC of DNA methylation that goes from from raw reads (FastQ) to …☆23Updated 3 years ago
- A list of alternative splicing analysis resources☆46Updated 5 months ago
- ☆32Updated 9 months ago
- A modular, containerized pipeline for ATAC-seq data processing☆59Updated 4 months ago
- Merge fastq files split over lanes☆20Updated 7 years ago
- Estimation of Promoter Activity from RNA-Seq data☆53Updated 2 months ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 2 years ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- A Spike-in Free ChIP-Seq Normalization Approach for Detecting Global Changes in Histone Modifications☆33Updated 3 years ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆27Updated 2 months ago
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆48Updated 2 weeks ago
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆62Updated 9 months ago
- A script to make downloading of SRA/GEO data easier☆31Updated last year
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆54Updated 3 years ago
- A pipeline for differential expression and differential alternative splicing analysis☆66Updated last year