dtm2451 / dittoSeqLinks
Color blindness friendly visualization of single-cell and bulk RNA-sequencing data
☆197Updated 9 months ago
Alternatives and similar repositories for dittoSeq
Users that are interested in dittoSeq are comparing it to the libraries listed below
Sorting:
- Fast Wilcoxon and auROC☆182Updated 7 months ago
- Clone of the Bioconductor repository for the SingleR package.☆191Updated 3 weeks ago
- Multi-sample multi-group scRNA-seq analysis tools☆194Updated last month
- Easy single cell analysis platform for enrichment☆184Updated 2 weeks ago
- Interactively analyze single cell genomic data☆182Updated last month
- Gene set variation analysis☆219Updated 2 months ago
- Generate high quality, publication ready visualizations for single cell transcriptomics data.☆198Updated last month
- R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆262Updated last week
- ☆172Updated last month
- R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data☆279Updated 2 years ago
- R package for modeling single cell UMI expression data using regularized negative binomial regression☆225Updated last month
- LIANA: a LIgand-receptor ANalysis frAmework☆208Updated 10 months ago
- Methods for detecting doublets in single-cell sequencing data☆196Updated 3 months ago
- R package to infer biological activities from omics data using a collection of methods.☆258Updated 3 months ago
- Gene set scoring for single-cell data☆153Updated last month
- Shiny Interactive Web Apps for Single-Cell Data☆190Updated 2 months ago
- ☆144Updated last week
- R package for analyzing and interactively exploring large-scale single-cell RNA-seq datasets☆231Updated last year
- This repository contains R code, with which you can create 3D UMAP and tSNE plots of Seurat analyzed scRNAseq data☆121Updated 2 years ago
- Tools and methods for analysis of single cell assay data in R☆241Updated last year
- An R package to test for batch effects in high-dimensional single-cell RNA sequencing data.☆162Updated last year
- A Shiny web app for mapping datasets using Seurat v4☆130Updated 7 months ago
- Scaling Single Cell Analysis to Millions of Cells☆217Updated last week
- Interpretation of cell states using reference single-cell maps☆278Updated last month
- Multiome GRN inference.☆124Updated last year
- A guide to using a Seurat object in conjunction with RNA Velocity☆139Updated 3 years ago
- A Bayesian model for compositional single-cell data analysis☆165Updated 2 years ago
- Some tools for plotting single-cell data☆171Updated last month
- R package implementation of Milo for testing for differential abundance in KNN graphs☆382Updated 3 weeks ago
- Cell type prioritization in single-cell data☆120Updated 8 months ago