doraadong / UNIFANLinks
Unsupervised cell functional annotation for single-cell RNA-Seq
☆22Updated 2 years ago
Alternatives and similar repositories for UNIFAN
Users that are interested in UNIFAN are comparing it to the libraries listed below
Sorting:
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆39Updated 8 months ago
- Regulatory networks with Direct Information in python☆40Updated 2 years ago
- Reproducing all analyses and figures for the ASAP-seq paper☆29Updated 3 years ago
- Imputation method for scRNA-seq based on low-rank approximation☆74Updated last year
- Mosaic single cell data integration using non-overlapping features☆37Updated 2 years ago
- RNA-velocity informed embeddings for visualizing cellular trajectories☆43Updated 2 years ago
- Spatially-resolved Transcriptomics via Epitope Anchoring☆19Updated last year
- A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better charac…☆42Updated 8 months ago
- scRNAseq integration with triplet neural networks☆40Updated 2 years ago
- ☆18Updated 3 years ago
- ☆11Updated last year
- Bootstrap imputation for scRNAseq data☆12Updated 4 years ago
- ☆13Updated 5 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆42Updated last year
- A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data☆23Updated 5 months ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆34Updated 4 years ago
- ACTIONet single-cell analysis framework☆41Updated 8 months ago
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆23Updated 4 years ago
- MultiMAP for integration of single cell multi-omics☆56Updated last year
- ☆19Updated 4 years ago
- R package for transfer learning of single-cell RNA-seq denoising☆30Updated 2 years ago
- Marker Selection by matching manifolds and elastic net☆23Updated 7 months ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆38Updated 3 years ago
- ☆30Updated last month
- CAST package☆38Updated 7 months ago
- Quasilinear data representations for single-cell omics data analysis☆42Updated 2 years ago
- Multi-study integration of cellular trajectories☆19Updated 4 years ago
- cTPnet Package☆25Updated 2 years ago
- ☆16Updated 10 months ago
- Companion repository to Lause, Berens & Kobak (2021): "Analytic Pearson residuals for normalization of single-cell RNA-seq UMI data", Gen…☆40Updated 3 years ago