doraadong / UNIFANLinks
Unsupervised cell functional annotation for single-cell RNA-Seq
☆22Updated 2 years ago
Alternatives and similar repositories for UNIFAN
Users that are interested in UNIFAN are comparing it to the libraries listed below
Sorting:
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆40Updated 9 months ago
- MultiMAP for integration of single cell multi-omics☆56Updated last year
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆23Updated 4 years ago
- Bootstrap imputation for scRNAseq data☆12Updated 4 years ago
- Imputation method for scRNA-seq based on low-rank approximation☆78Updated last year
- Regulatory networks with Direct Information in python☆40Updated 2 years ago
- Marker Selection by matching manifolds and elastic net☆23Updated 8 months ago
- R package for transfer learning of single-cell RNA-seq denoising☆30Updated 3 years ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- RNA-velocity informed embeddings for visualizing cellular trajectories☆43Updated 2 years ago
- Reproducing all analyses and figures for the ASAP-seq paper☆29Updated 4 years ago
- Predicted cell-cell interactions of the aging mouse brain☆20Updated 5 years ago
- scRNAseq integration with triplet neural networks☆41Updated 2 years ago
- Dynamical systems methods for RNA velocity analysis☆24Updated 4 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 6 years ago
- spatial transcriptome, single cell☆68Updated 2 years ago
- Companion repository to Lause, Berens & Kobak (2021): "Analytic Pearson residuals for normalization of single-cell RNA-seq UMI data", Gen…☆40Updated 3 years ago
- ☆18Updated 4 years ago
- ☆55Updated last year
- Quasilinear data representations for single-cell omics data analysis☆42Updated 2 years ago
- Learning motif contributions to cell transitions using sequence features and graphs.☆28Updated 10 months ago
- Simultaneous deep generative modeling and clustering of single cell genomic data☆32Updated 2 years ago
- ☆37Updated last week
- Spatially-resolved Transcriptomics via Epitope Anchoring☆19Updated last year
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆38Updated 3 years ago
- Data processing and analysis scripts for our spatial profiling of embryos using seqFISH☆17Updated 2 years ago
- CiteFuse:☆28Updated 2 years ago
- Code for reproducing "Exploring genetic interaction manifolds constructed from rich single-cell phenotypes"☆54Updated 5 years ago
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 5 months ago
- ACTIONet single-cell analysis framework☆42Updated 9 months ago