Uncovering cell identity genes using differential stability of expression in single cells.
☆15Jul 2, 2024Updated last year
Alternatives and similar repositories for Cepo
Users that are interested in Cepo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Single-cell Consensus Clusters of Encoded Subspaces☆15Aug 14, 2023Updated 2 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆21Jan 4, 2023Updated 3 years ago
- Official repository for Characterization of tumor heterogeneity through segmentation-free representation learning on multiplexed imaging …☆15Sep 28, 2025Updated 7 months ago
- Execute command line tool from R☆20Mar 17, 2026Updated 2 months ago
- Single-cell Analysis of Host-Microbiome Interactions☆11Jul 17, 2025Updated 10 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Interactive single cell RNA-seq analysis webserver!☆10Mar 15, 2023Updated 3 years ago
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆39Aug 10, 2023Updated 2 years ago
- ☆13Sep 7, 2023Updated 2 years ago
- ☆15Jul 25, 2025Updated 9 months ago
- Benchmarking computational doublet-detection methods for single-cell RNA sequencing data☆10Feb 25, 2021Updated 5 years ago
- The main repository for ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective vari…☆10Jan 23, 2023Updated 3 years ago
- A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics☆14Jan 9, 2026Updated 4 months ago
- Split a BAM file by haplotype support☆16Dec 13, 2017Updated 8 years ago
- ☆12Nov 7, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- This is a repository of the scLinaX R package developed in the Tomofuji et al (Quantification of escape from X chromosome inactivation wi…☆11Sep 12, 2025Updated 8 months ago
- Single cell analysis tools for expression from RNA-seq in R☆10Feb 3, 2016Updated 10 years ago
- A tidyverse and grammar of graphics powered line traces visualizer☆31Sep 3, 2025Updated 8 months ago
- Create columns by applying functions to vectors and/or columns in 'dplyr'.☆59Oct 3, 2021Updated 4 years ago
- Perform taxonomic profiling analyses for long-read shotgun metagenomic datasets. Developed for the Long Read Sequencing Workshop 2022 at …☆13May 12, 2022Updated 4 years ago
- Information-based dimensionality reduction☆29Dec 14, 2024Updated last year
- A collection of plots for long read sequencing FastQ files from devices like Oxford Nanopore's MinION and PromethION.☆12Feb 14, 2023Updated 3 years ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆13Sep 21, 2023Updated 2 years ago
- Neuroimgaing data processing pipelines used in the lab☆21Jul 23, 2019Updated 6 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- a re-packaging of the sankey plot function for kraken reports taken from pavian and sankeyD3 from Florian Breitwieser☆15Dec 5, 2025Updated 5 months ago
- Brain Cell Type Specific Gene Expression Analysis☆18Dec 27, 2023Updated 2 years ago
- This repository provides the dataset HEMIT for H&E to mIHC image-to-image translation task☆24Dec 11, 2024Updated last year
- ☆19Mar 31, 2023Updated 3 years ago
- Code supporting Hansen et al., 2021, Nature Human Behaviour "Mapping gene transcription and neurocognition across human neocortex".☆24Sep 22, 2022Updated 3 years ago
- Metagenomic Binning Algorithm☆51Jan 16, 2026Updated 4 months ago
- LaTeX template of graduate Thesis [University of Chinese Academy of Sciences]☆12Nov 7, 2017Updated 8 years ago
- ☆16Mar 18, 2025Updated last year
- ☆17Dec 9, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- slurm utility for reporting job statistics☆17Sep 27, 2024Updated last year
- scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics☆119Sep 29, 2025Updated 7 months ago
- ☆34Mar 30, 2025Updated last year
- Updated Kraken DB install scripts to cope with new-ish NCBI structure☆16Jan 25, 2020Updated 6 years ago
- Code related to the brainwide map paper☆35Mar 27, 2026Updated last month
- ☆19Sep 29, 2021Updated 4 years ago
- Material for a workshop on reproducible science with R and RStudio☆15May 22, 2022Updated 3 years ago