rs239 / schema
Framework for integrating heterogeneous modalities of data
☆17Updated 2 years ago
Alternatives and similar repositories for schema:
Users that are interested in schema are comparing it to the libraries listed below
- ☆15Updated 2 years ago
- ☆20Updated 3 years ago
- Alignment of spatial genomics data using deep Gaussian processes☆27Updated 2 years ago
- Archetypal Analysis network (AAnet)☆31Updated 2 months ago
- ☆16Updated last year
- Template repository for creating novel models with scvi-tools☆20Updated 2 years ago
- Gaussian process regression package for counts data with negative binomial and zero-inflated negative binomial likelihoods☆21Updated last month
- Regulatory networks with Direct Information in python☆40Updated 2 years ago
- This Python package will allow you to replicate the experiments from our research on applying Optimal Transport as a similarity metric in…☆38Updated 2 years ago
- Unsupervised cell functional annotation for single-cell RNA-Seq☆22Updated 2 years ago
- Dynamical systems methods for RNA velocity analysis☆24Updated 3 years ago
- ☆29Updated last month
- ☆16Updated 2 years ago
- ☆29Updated 3 years ago
- Test genes for Spatial Variation☆14Updated 3 months ago
- Dynamic inference from single-cell snapshots by optimal transport☆19Updated last year
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Updated 6 months ago
- Conditional out-of-distribution prediction☆57Updated 8 months ago
- Code for reproducing "Exploring genetic interaction manifolds constructed from rich single-cell phenotypes"☆51Updated 4 years ago
- R package for transfer learning of single-cell RNA-seq denoising☆30Updated 2 years ago
- Batch-adversarial variational auto-encoder (BAVARIA) for simultaneous dimensionality reduction and integration of single-cell ATAC-seq da…☆13Updated last year
- ☆19Updated 2 years ago
- Code for Universal Single-Cell Matching with Unpaired Feature Sets☆21Updated 3 years ago
- Learning motif contributions to cell transitions using sequence features and graphs.☆28Updated 7 months ago
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆49Updated 3 years ago
- An unsupervised scRNA-seq analysis workflow with graph attention networks☆24Updated last year
- Learning disentangled representations of single-cell data for high-quality generation☆16Updated last year
- scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks☆11Updated 4 years ago
- A probabilistic factor model for spatial transcriptomics data with subcellular resolution☆23Updated last year
- The software of Pamona, a partial manifold alignment algorithm.☆19Updated 4 years ago