CRISPR Indel, base edit analysis
☆11Aug 1, 2020Updated 5 years ago
Alternatives and similar repositories for CRISPR_toolkit
Users that are interested in CRISPR_toolkit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Modelling insertion efficiency for Prime Insertion Experiments☆13Apr 1, 2024Updated last year
- ☆59Sep 27, 2021Updated 4 years ago
- CHANGE-seq analysis pipeline☆11Dec 18, 2025Updated 3 months ago
- Source codes and examples for DeepPrime☆13Dec 17, 2024Updated last year
- Core code for the DeepHF prediction tool☆40Jul 23, 2019Updated 6 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Variational Auto Encoders for learning binding signatures of transcription factors☆14Mar 14, 2024Updated 2 years ago
- Calculates the Variant Allele Fraction of variants in VCF files☆19Nov 28, 2024Updated last year
- ☆14May 30, 2021Updated 4 years ago
- Digenome-toolkit ver2.☆16Nov 1, 2021Updated 4 years ago
- Python library for genome editing, CRISPR gRNA design and prediction☆21Dec 2, 2025Updated 3 months ago
- for a tutorial at useR2018☆17Jul 9, 2018Updated 7 years ago
- ☆16Apr 18, 2025Updated 11 months ago
- Python script for calling SNPs, MNPs, and indels in mitochondrial DNA.☆10Apr 19, 2016Updated 9 years ago
- ggDoubleHeat: A heatmap-like visualization tool☆15Sep 12, 2025Updated 6 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- ☆10Jan 30, 2020Updated 6 years ago
- Deep conditional autoregressive models for genome editing sequence-to-sequence problems☆10Jun 29, 2021Updated 4 years ago
- A Similarity-Guided Alignment Algorithm☆28Feb 7, 2026Updated last month
- ☆24Mar 19, 2026Updated last week
- Control an Illumina HiSeq 2500 System☆21Oct 22, 2024Updated last year
- Python based Graphical User Interface for generating input files for and running molecular dynamic simulation.☆10Aug 27, 2024Updated last year
- A comprehensive analysis tool for Ribo-seq and small RNA-seq data☆10Jun 22, 2020Updated 5 years ago
- ☆10Sep 11, 2020Updated 5 years ago
- splicing and feature maps for RBPs☆25Mar 11, 2026Updated 2 weeks ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- Fast python code to merge paired-end reads☆13Oct 29, 2021Updated 4 years ago
- ChIP-seq and ATAC-seq analysis☆13Jun 17, 2024Updated last year
- ☆10Mar 6, 2025Updated last year
- Software developed at the Max Planck Institut für Eisenforschung☆13Jul 18, 2025Updated 8 months ago
- scRNA-seq Shiny App☆14May 1, 2023Updated 2 years ago
- An unbiased method for genome-wide CBE off-targets assessment☆13Mar 9, 2023Updated 3 years ago
- eVOLVER Hardware (PCB, 3D printed parts)☆11Sep 15, 2025Updated 6 months ago
- Software used to design guide RNA sequences for CRISPR/Cas9 genome editing☆16Apr 13, 2023Updated 2 years ago
- ☆17Sep 4, 2024Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Efficient Sequential and Batch Estimation of Univariate and Bivariate Probability Density Functions and Cumulative Distribution Functions…☆17Aug 31, 2024Updated last year
- ☆28Jan 6, 2026Updated 2 months ago
- RNAseq pipeline for alternative splicing junctions☆14Apr 23, 2025Updated 11 months ago
- Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments☆333Mar 18, 2026Updated last week
- A Shiny App for visualizing genomic data☆19Apr 24, 2022Updated 3 years ago
- A step-by-step tutorial to run Molecular Dynamics Simulations with enhanced sampling of a pepitide using PLUMED implemented in GROMACS to…☆15Mar 4, 2024Updated 2 years ago
- microRNA PREdiction From small RNA-seq data☆31Dec 28, 2017Updated 8 years ago