CRISPRJWCHOI / CRISPR_toolkitLinks
CRISPR Indel, base edit analysis
☆10Updated 5 years ago
Alternatives and similar repositories for CRISPR_toolkit
Users that are interested in CRISPR_toolkit are comparing it to the libraries listed below
Sorting:
- Modelling insertion efficiency for Prime Insertion Experiments☆13Updated last year
- CHANGE-seq analysis pipeline☆10Updated 5 months ago
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated 8 months ago
- Generate robust DNA barcode sets☆33Updated last year
- Code from "Deep Learning Of The Regulatory Grammar Of Yeast 5′ Untranslated Regions From 500,000 Random Sequences"☆15Updated 8 years ago
- BAGEL software☆28Updated last year
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated 2 years ago
- Bayesian enrichment estimation in R☆11Updated 3 years ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- SPLICE-q -- A Python tool for genome-wide SPLIcing Efficiency quantification from RNA-seq data.☆12Updated 2 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆32Updated 3 weeks ago
- LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning☆28Updated 7 years ago
- ☆15Updated 3 years ago
- This script use to analyze the immune repertoire sequenced by high throughtput sequencing☆25Updated 3 years ago
- Ultra-fast 5' and 3' demultiplexer☆28Updated last year
- A portable, flexible, parallelized tool for complete processing of massively parallel reporter assay data☆34Updated 9 months ago
- splicing and feature maps for RBPs☆25Updated 3 years ago
- An ultra-sensitive and precise tool for characterizing T cell CDR3 sequences in TCR-seq and RNA-seq data.☆22Updated last year
- DRUGZ software☆23Updated 4 years ago
- ☆39Updated 3 months ago
- Pipeline for Ribosome Profiling Data☆17Updated 2 years ago
- Versatile FASTA/FASTQ demultiplexer.☆33Updated last year
- FREE Divergence Error-Correcting DNA Barcodes☆27Updated 8 months ago
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago
- off-targeting assessment of Cas9 gRNAs☆14Updated 4 years ago
- Comprehensive and scalable differential splicing analyses☆17Updated 7 months ago
- Splits fastq files evenly☆22Updated 5 years ago
- Python package to annotate and visualize gene fusions.☆64Updated last year
- Comprehensive design of CRISPR gRNAs for nucleases and base editors☆24Updated 7 months ago
- Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9…☆23Updated 2 months ago