Alternatives and similar repositories for BindVAE:

Users that are interested in BindVAE are comparing it to the libraries listed below

• nf-core / kmermaid
  k-mer similarity analysis pipeline
  ☆21Updated this week
• goodarzilab / SwitchFinder
  ☆17Updated 9 months ago
• Seeliglab / 2017---Deep-learning-yeast-UTRs
  Code from "Deep Learning Of The Regulatory Grammar Of Yeast 5′ Untranslated Regions From 500,000 Random Sequences"
  ☆15Updated 7 years ago
• cinquin / MEME
  MEME motif-based sequence analysis tools (http://meme-suite.org), with FreeBSD tweaks
  ☆10Updated 7 years ago
• fedarko / strainFlye
  Pipeline for analyzing (rare) mutations in metagenome-assembled genomes
  ☆11Updated last month
• soedinglab / tejaas
  Tejaas - a tool for discovering trans-eQTLs
  ☆11Updated 2 years ago
• finkelsteinlab / freebarcodes
  FREE Divergence Error-Correcting DNA Barcodes
  ☆8Updated 6 years ago
• jhhung / EARRINGS
  EARRINGS: An efficient and ingenious adapter removal design for large-scale NGS meta-analyses
  ☆9Updated 2 weeks ago
• kuijjerlab / PySNAIL
  Smooth-quantile Normalization Adaptation for Inference of co-expression Links
  ☆16Updated last year
• matsengrp / phip-flow
  A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets
  ☆12Updated 2 months ago
• vsbuffalo / hgindex
  Hierarchical binned indexed data store for on-disk genomic data.
  ☆14Updated 3 months ago
• pantherdb / TreeGrafter
  TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.
  ☆11Updated 4 years ago
• Immunotools / IgDetective
  a tool for annotation of immunoglobulin genes in genome assemblies
  ☆10Updated 2 months ago
• sims-lab / CapCruncher
  Analysis tool for NG-Capture-C, Tri-C and Tiled-C data
  ☆9Updated this week
• maxwellsh / DIGDriver
  Flexible and efficient tests for evidence of positive selection anywhere in the cancer genome.
  ☆25Updated 2 years ago
• h-samee / shape-motif
  ☆10Updated 6 years ago
• GCA-VH-lab / uorf4u
  uorf4u is a bioinformatics tool for conserved upstream ORF annotation.
  ☆13Updated 3 months ago
• ML4GLand / SeqPro
  Genomic sequence preprocessing toolkit
  ☆12Updated last week
• julianeweller / MinsePIE
  Modelling insertion efficiency for Prime Insertion Experiments
  ☆13Updated last year
• chaolinzhanglab / DeltaSplice
  A neural network model to predict splice site usage and splicing-altering mutations
  ☆11Updated 3 months ago
• lh3 / nasw
  Dynamic programming for aa-to-nt alignment with affine gap, splicing and frameshift
  ☆19Updated 7 months ago
• c5shen / EMMA
  an ensemble usage of MAFFT-linsi --add on large datasets
  ☆12Updated 11 months ago
• Benson-Genomics-Lab / IRF
  Inverted Repeats Finder: a program to analyze DNA and RNA sequences
  ☆17Updated 2 months ago
• bartongroup / differr_nanopore_DRS
  Scripts for identifying sites with differential error rates in mapped nanopore DRS data
  ☆11Updated 4 years ago
• CRISPRJWCHOI / CRISPR_toolkit
  CRISPR Indel, base edit analysis
  ☆10Updated 4 years ago
• pierrepeterlongo / kmer2sequences
  Given a set of kmers (fasta format) and a set of sequences (fasta format), this tool will extract the sequences containing the kmers.
  ☆21Updated last year
• ruhulsbu / DeepAnnotator
  ☆10Updated 6 years ago
• songlab-cal / CherryML
  Scalable Maximum Likelihood Estimation of Phylogenetic Models
  ☆13Updated last month
• saezlab / flop
  FunctionaL Omics Processing platform
  ☆13Updated 9 months ago
• arshajii / lava
  LAVA: Lightweight Assignment of Variant Alleles
  ☆17Updated 7 years ago