merlebehr / treeSegLinks
Implementation of the treeSeg algorithm as an R package.
☆14Updated 3 years ago
Alternatives and similar repositories for treeSeg
Users that are interested in treeSeg are comparing it to the libraries listed below
Sorting:
- ☆18Updated 3 weeks ago
- ☆28Updated last year
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 6 years ago
- A smorgasbord of R functions for performing and teaching population genomic analyses☆19Updated last month
- Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)☆57Updated 10 years ago
- ☆19Updated last year
- Using kallisto for metagenomic analysis☆49Updated 8 years ago
- Maximum Likelihood Amplicon Pipeline☆22Updated last year
- FREE Divergence Error-Correcting DNA Barcodes☆10Updated 7 years ago
- Algorithm for rapid, phase-free detection of long identical by descent segments☆22Updated last year
- [mu]tation [s]pectrum [h]istory [i]nference☆27Updated 9 months ago
- Preprocessing paired-end reads produced with experiment-specific protocols☆32Updated 7 years ago
- Minimal Assumption Genomic Inference of Coalescence☆14Updated 2 years ago
- Transposon Insertion Finder - Detection of new TE insertions in NGS data☆20Updated 5 months ago
- Flexible linear mixed model framework for Genome Wide Association Studies☆18Updated 3 weeks ago
- Scalable relaxed clock phylogenetic dating☆27Updated last month
- A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)☆24Updated 4 years ago
- Summarize and filter read alignments from multiple sequencing samples (taken as sorted BAM files)☆17Updated 2 weeks ago
- Demographic inference from whole genomes☆13Updated 3 years ago
- ALDEx_bioc is the working directory for updating bioconductor☆29Updated 5 months ago
- Reference genome quality scores☆21Updated 4 years ago
- SAMsift: advanced filtering and tagging of SAM/BAM alignments using Python expressions.☆23Updated last month
- Evolutionary Transcriptomics with R☆46Updated 2 weeks ago
- Single-header C++ library for fast/low-memory VCF (Variant Call Format) parsing.☆17Updated 2 weeks ago
- ☆19Updated 3 years ago
- Exhaustive capture of biological variation in RNA-seq data through k-mer decomposition.☆15Updated 7 years ago
- A Nextflow pipeline for running synteny analysis.☆16Updated 4 months ago
- R We There Yet?☆31Updated 7 months ago
- Response to blog post about Salmon☆37Updated 8 years ago
- Color DNA/RNA bases in terminal output☆21Updated 8 years ago