Hierarchical classification of cells
☆28Aug 2, 2024Updated last year
Alternatives and similar repositories for scClassify
Users that are interested in scClassify are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14Jan 23, 2026Updated 2 months ago
- Automated marker-based annotation of cell types☆14Aug 8, 2022Updated 3 years ago
- Cytometry by time-of-flight(CyTOF) data is very useful in studying the presence/absence of antigens/surface markers at single cell level.…☆14Jun 1, 2020Updated 5 years ago
- CiteFuse:☆28Feb 7, 2023Updated 3 years ago
- scID☆14Oct 21, 2021Updated 4 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- SuperCell for Cytometry data☆13Oct 14, 2025Updated 5 months ago
- scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks☆11Aug 4, 2020Updated 5 years ago
- R package for "Multi-tissue Transcriptome-Wide Association Studies (MTWAS)"☆17Oct 7, 2025Updated 6 months ago
- Code for evaluation of differential expression methods in single-cell RNA-seq data☆112Aug 13, 2020Updated 5 years ago
- Statistical approach for removing unwanted variation from multiple single-cell datasets☆71Apr 12, 2024Updated last year
- An r interface to perform ROMA☆10Aug 24, 2018Updated 7 years ago
- Whole slide image registration through wsireg in napari.☆12Apr 21, 2023Updated 2 years ago
- GIANT (Gene-based data Integration and ANalysis Technique) is a method for large-scale joint analyses of atlas-level single cell data.☆14Jun 13, 2023Updated 2 years ago
- ☆29Sep 4, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Single-Cell Analysis of Immune Cells from Renal Clear Cell Carcinoma☆21Aug 15, 2021Updated 4 years ago
- Human brain, >200,000 nuclei☆24Jun 17, 2021Updated 4 years ago
- ☆25Aug 5, 2025Updated 8 months ago
- Reanalysis of the repressive capacity of promoter DNA methylation☆11Feb 14, 2019Updated 7 years ago
- post-clustering differential expression test☆36May 28, 2019Updated 6 years ago
- An R package with wrappers and pipelines for single cell RNA-seq analysis☆13Mar 23, 2026Updated 2 weeks ago
- scPred package for cell type prediction from scRNA-seq data☆100Jan 18, 2024Updated 2 years ago
- R package for detection of cell-cell interaction using Non-negative Tensor Decomposition☆35Jun 19, 2025Updated 9 months ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Dec 15, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- ☆49Mar 1, 2018Updated 8 years ago
- ☆21May 6, 2025Updated 11 months ago
- Spatial Image Analysis of Tissues☆15Dec 8, 2022Updated 3 years ago
- ☆13Mar 20, 2021Updated 5 years ago
- ☆21Aug 4, 2024Updated last year
- These workshops and tutorials provide use cases and examples for mass spectrometry data handling and analysis using the Spectra Bioconduc…☆22Aug 7, 2024Updated last year
- Variational Auto Encoders for learning binding signatures of transcription factors☆14Mar 14, 2024Updated 2 years ago
- This package removes unwanted variation from raw sequencing count data using Negative Binomial and/or Zero Inflated Negative Binomial mod…☆18Jun 13, 2024Updated last year
- Code for "Single cell transcriptomes from human kidneys reveal the cellular identity of renal tumours"☆27Jun 5, 2018Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆11Jan 7, 2020Updated 6 years ago
- fast hierarchical clustering for large-scale single-cell data☆10Jul 11, 2021Updated 4 years ago
- ☆29Jul 25, 2024Updated last year
- a light structured Residual autoencoder and mutual nearest neighbor Paring guided Adversarial Network for scRNA-seq batch correction☆15Jul 13, 2023Updated 2 years ago
- R package (compatible with SCope) to create generic .loom files and extend them with other data e.g.: SCENIC regulons, Seurat clusters an…☆48Apr 8, 2022Updated 4 years ago
- Single cell interactive plotting tools☆24Jun 12, 2020Updated 5 years ago
- An R package for extracting mutational signatures from vcf files☆11Feb 13, 2025Updated last year