dgrun / RaceID3_StemID2
Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. Please download the R package from the RaceID3_StemID2_package repository, which contains the current version as an R package. This repository will not be updated anymore.
☆15Updated 6 years ago
Alternatives and similar repositories for RaceID3_StemID2:
Users that are interested in RaceID3_StemID2 are comparing it to the libraries listed below
- R-code used for single-cell RNA-Seq analysis of kidney data.☆17Updated 5 years ago
- simpler single cell RNAseq data clustering☆40Updated 9 months ago
- ☆13Updated 7 years ago
- R package for robust clustering of single cell RNA sequencing data☆38Updated last year
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 4 years ago
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- ☆10Updated 7 years ago
- Codes associated with the Poran, Nötzel et al. paper titled "Single-cell RNA-seq reveals a signature of sexual commitment in malaria para…☆10Updated 7 years ago
- mutation(barcode) caller for 10x single cell data☆44Updated 4 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆47Updated last year
- A tool for removing doublets from single-cell RNA-seq data☆71Updated 4 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆32Updated last year
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆76Updated 2 years ago
- ChIP-seq analysis notes from Tommy Tang☆19Updated 8 years ago
- Hypoxia associated molecular feature analysis☆35Updated 5 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆42Updated last year
- Mollecular Functional Portraits☆36Updated 10 months ago
- ☆59Updated 5 years ago
- ☆53Updated 4 years ago
- scRNA-seq cell type identification☆44Updated 5 years ago
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆74Updated last year
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data.☆42Updated 7 years ago
- ☆10Updated 6 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- Code repository for single cell RNA-seq☆34Updated 4 years ago
- ☆14Updated last year
- ☆64Updated 2 years ago
- A R package for advanced single cell data viz☆63Updated last year
- Mouse cell atlas☆60Updated 4 years ago
- ☆12Updated 7 months ago