Alternatives and similar repositories for CellBench:

Users that are interested in CellBench are comparing it to the libraries listed below

• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆25Updated last year
• statOmics / satuRn
  satuRn is a highly performant and scalable method for performing differential transcript usage analyses.
  ☆21Updated last year
• myles-lewis / glmmSeq
  Gene-level general linear mixed model
  ☆19Updated last month
• markziemann / mitch
  An R package for multi-dimensional pathway enrichment analysis
  ☆16Updated 2 months ago
• SimoneTiberi / distinct
  distinct: a method for differential analyses via hierarchical permutation tests
  ☆11Updated last year
• BUStools / BUS_notebooks_R
  R vignettes for processing BUS format single-cell RNA-seq files
  ☆20Updated 5 years ago
• leekgroup / networks_correction
  Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"
  ☆16Updated 5 years ago
• gjhunt / dtangle
  Cell type deconvolution from high-throughput gene expression profiling experiments.
  ☆31Updated 4 years ago
• Bioconductor / basilisk
  Clone of the Bioconductor repository for the basilisk package.
  ☆27Updated last week
• kevinblighe / CorLevelPlot
  Visualise correlation results and test significancies of these
  ☆21Updated 5 years ago
• skinnider / dismay
  Calculation of distance metrics for matrices
  ☆25Updated 5 years ago
• cz-ye / DECENT
  Differential Expression with Capture Efficiency adjustmeNT
  ☆14Updated 2 years ago
• csoneson / countsimQC
  countsimQC - Compare characteristic features of count data sets
  ☆27Updated last month
• jgamache014 / snRNA-seq-workflow
  Human brain, >200,000 nuclei
  ☆24Updated 3 years ago
• waldronlab / MultiAssayWorkshop
  Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment
  ☆19Updated last year
• tengfei-emory / scBatch
  Batch Effect Correction of RNA-seq Data through Sample Distance Matrix Adjustment
  ☆17Updated 3 years ago
• greenelab / miQC
  Flexible, probablistic metrics for quality control of scRNA-seq data
  ☆19Updated 2 years ago
• stephaniehicks / spatialexperiment-analysis
  repo to explore spatial data in R/Bioconductor and Python
  ☆12Updated 5 years ago
• statOmics / zinbwaveZinger
  Integrating zingeR with ZINB-WaVE weights
  ☆23Updated 7 years ago
• caleblareau / bap
  Bead-based single-cell atac processing
  ☆31Updated 3 years ago
• kstreet13 / scry
  Collection of analysis methods for small count data generated by rafalab members (the methods, not the data).
  ☆19Updated 7 months ago
• igrabski / scRNAseq-cell-type
  Probabilistic gene expression barcodes for cell type annotation
  ☆25Updated 2 years ago
• Simon-Leonard / FlexDotPlot
  R package for Flexible dot plots
  ☆29Updated 2 years ago
• immunogenomics / singlecellmethods
  Collection of useful methods for single cell analysis
  ☆14Updated 5 months ago
• epurdom / clusterExperiment
  R package of techniques for comparing clusterings of single-cell sequencing data
  ☆39Updated 9 months ago
• HelenaLC / muscat-comparison
  ☆12Updated 9 months ago
• waldronlab / SingleCellMultiModal
  Single Cell multimodal data scripts for downloading datasets
  ☆17Updated 3 months ago
• kevinrue / velociraptor
  Toolkit for Single-Cell Velocity
  ☆54Updated last month
• oganm / homologene
  An r package that works as a wrapper to homologene
  ☆42Updated last year
• sa-lee / superintronic
  A tidy interface for coverage analysis
  ☆24Updated 5 years ago