lanjiangboston / GiniClustLinks
GiniClust: Detecting Rare Cell Types from Single-Cell Gene Expression Data with Gini Index
☆35Updated 6 years ago
Alternatives and similar repositories for GiniClust
Users that are interested in GiniClust are comparing it to the libraries listed below
Sorting:
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆44Updated 9 years ago
- ☆28Updated 6 years ago
- ☆34Updated 5 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 2 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- Big data Regression for predicting DNase I hypersensitivity☆30Updated 9 months ago
- ☆41Updated 4 years ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 4 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated last year
- ☆16Updated 6 years ago
- Clone of the Bioconductor repository for the scran package.☆42Updated 9 months ago
- Single-cell Scalable Visualization and Analytics☆25Updated 6 years ago
- Clone of the Bioconductor repository for the batchelor package.☆16Updated 2 months ago
- ☆22Updated 5 years ago
- ☆37Updated 8 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated 10 months ago
- R package for robust clustering of single cell RNA sequencing data☆39Updated last year
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆54Updated 4 years ago
- Single Cell Epigenome-based Inference of Activity☆19Updated last year
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆40Updated 2 years ago
- ☆20Updated 5 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 5 years ago
- Reconstruct the lineage topology of a scRNA-seq differentiation dataset.☆18Updated 4 years ago
- ☆53Updated 3 months ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 3 years ago
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆49Updated 4 years ago
- Identify genes with spatial expression trends in single-cell gene expression data☆50Updated 7 years ago
- Single-cell Orientation Tracing☆21Updated 3 years ago
- scRNA-seq cell type identification☆43Updated 5 years ago