lanjiangboston / GiniClust
GiniClust: Detecting Rare Cell Types from Single-Cell Gene Expression Data with Gini Index
☆36Updated 6 years ago
Alternatives and similar repositories for GiniClust:
Users that are interested in GiniClust are comparing it to the libraries listed below
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆44Updated 8 years ago
- ☆28Updated 6 years ago
- ☆34Updated 5 years ago
- ☆37Updated 8 years ago
- An R-based interface for loom files☆66Updated 4 years ago
- ☆53Updated 2 months ago
- ☆41Updated 4 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- Clone of the Bioconductor repository for the scran package.☆41Updated 8 months ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 5 years ago
- Clustering cells from single cell RNA seq assays☆46Updated 6 years ago
- Big data Regression for predicting DNase I hypersensitivity☆30Updated 8 months ago
- COMET Single-Cell Marker Detection tool☆31Updated 2 years ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆54Updated 4 years ago
- ☆16Updated 5 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated last year
- ☆35Updated 2 months ago
- Clone identification from single-cell data☆61Updated 2 years ago
- Single-cell Scalable Visualization and Analytics☆25Updated 6 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated 9 months ago
- ☆22Updated 5 years ago
- Reconstruct the lineage topology of a scRNA-seq differentiation dataset.☆18Updated 4 years ago
- ☆59Updated 8 months ago
- ☆32Updated 5 years ago
- scRNA-seq cell type identification☆44Updated 5 years ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 4 years ago
- R package for robust clustering of single cell RNA sequencing data☆39Updated last year
- ☆20Updated 5 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data.☆42Updated 8 years ago
- <<------ Use SnapATAC!!☆25Updated 6 years ago