kdkorthauer / scDD
R package to identify genes with differential distributions in single-cell RNA-seq
☆32Updated 2 years ago
Alternatives and similar repositories for scDD:
Users that are interested in scDD are comparing it to the libraries listed below
- A R package for Grade of Membership model and Visualization of counts data:☆31Updated 4 years ago
- HSCI/Catalyst Single-cell RNA-Seq Workshop☆19Updated 5 years ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆44Updated 4 years ago
- Figure depicting the breadth of multimodal scRNA-seq technologies☆15Updated 5 years ago
- An r package that works as a wrapper to homologene☆42Updated last year
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆44Updated 8 years ago
- ☆28Updated 5 years ago
- Identify and correct invalid gene symbols☆56Updated 2 months ago
- R package to visualize scRNA sequencing data.☆20Updated 2 years ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 3 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 2 years ago
- Clone of the Bioconductor repository for the batchelor package.☆16Updated 6 months ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆44Updated last year
- Harvard FAS informatics scRNAseq workshop website☆37Updated 5 years ago
- post-clustering differential expression test☆35Updated 5 years ago
- Toolkit for Single-Cell Velocity☆54Updated 2 weeks ago
- ☆15Updated 4 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆34Updated 3 years ago
- R package for benchmarking single cell analysis methods☆30Updated last year
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data.☆42Updated 7 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 7 months ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated 3 months ago
- An analytics package for single cell data☆21Updated 2 years ago
- Independent Hypothesis Weighting☆15Updated last year
- Normalization for single cell RNA-seq data☆47Updated last year
- Building on material from Introduction to Single Cell RNA-Seq, this workshop aims to cover advanced topics, including TCR and trajectory …☆13Updated last year
- ☆53Updated 3 months ago
- ☆20Updated 6 months ago
- R package for robust clustering of single cell RNA sequencing data☆38Updated last year
- R package for reading in & working with NucleoATAC outputs☆26Updated 6 years ago