DUBStepR (Determining the Underlying Basis using Step-wise Regression) is a feature selection algorithm for cell type identification in single-cell RNA-sequencing data. This repository is no longer maintained - please refer to https://github.com/prabhakarlab/DUBStepR.
☆11May 26, 2021Updated 4 years ago
Alternatives and similar repositories for DUBStepR
Users that are interested in DUBStepR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Correlation-Based Feature Selection for Single-Cell RNA Sequencing Data☆21Jul 19, 2022Updated 3 years ago
- The R/Python scripts for the analysis of single-cell RNA-seq data from COVID-19 patients☆10Dec 16, 2020Updated 5 years ago
- interactive visualization of single-cell transcriptomes☆11Mar 10, 2026Updated last month
- scGMAI: a Gaussian mixture model for clustering single-cell RNA-seq data based on deep autoencoder☆15Jun 7, 2021Updated 4 years ago
- ☆11Updated this week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- R package for robust clustering of single cell RNA sequencing data☆40Jul 10, 2023Updated 2 years ago
- ☆12Aug 29, 2024Updated last year
- Identification of clone-specific and cancer-selective multi-targeting therapeutic options based on single-cell transcriptomic profiles of…☆21Feb 20, 2025Updated last year
- ☆12Jul 13, 2018Updated 7 years ago
- Fitting latent factor mixed models☆13Jun 12, 2020Updated 5 years ago
- R package to BLAST peptide sequences against each other and identify the minimal overlap of aligning regions.☆16Aug 26, 2025Updated 7 months ago
- ☆32Mar 4, 2024Updated 2 years ago
- 🌓 Allele specific analyses across cell states and conditions☆10Nov 28, 2022Updated 3 years ago
- 影像组学分析☆35Jan 14, 2024Updated 2 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- An algorithm used to classify the cell types from single cell rna sequence data.☆10Jan 24, 2021Updated 5 years ago
- ☆25Aug 1, 2022Updated 3 years ago
- This is the repository accompanying the pre-print titled, "Genome-wide analyses of 200,453 individuals yield new insights into the causes…☆13Jun 9, 2022Updated 3 years ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆87Dec 4, 2025Updated 4 months ago
- Comparison of single cell normalization strategies☆10Aug 13, 2021Updated 4 years ago
- Workflow for performing cistrome-wide associations studies☆11Jul 25, 2022Updated 3 years ago
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆34Apr 11, 2025Updated last year
- A program that can help you solve any Rubik's Cube using Fredrich CFOP Algorithms.☆15Sep 29, 2019Updated 6 years ago
- A comprehensive platform for population-scale genomic analyses☆10Jul 10, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆47May 13, 2016Updated 9 years ago
- Spatial cellular architecture predicts prognosis in glioblastoma - Nature Communications☆25Dec 11, 2023Updated 2 years ago
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Sep 20, 2022Updated 3 years ago
- The million-scale method for single-cell analysis☆10Jul 6, 2023Updated 2 years ago
- Effective Functions for mixed model☆13Jul 10, 2024Updated last year
- SAME (Single-cell RNA-seq Aggregated clustering via Mixture model Ensemble): Cluster ensemble for single-cell RNA-seq data☆15May 4, 2021Updated 4 years ago
- ☆12Jun 28, 2024Updated last year
- EDGE☆15Aug 30, 2020Updated 5 years ago
- ☆14May 3, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- A 3D rendering program for Tkinter☆13Jan 8, 2025Updated last year
- RT2 Lab website, built with Jekyll.☆15Apr 12, 2023Updated 3 years ago
- HCA data analysis☆19Mar 30, 2021Updated 5 years ago
- R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data☆11Apr 19, 2023Updated 2 years ago
- ☆13Jul 11, 2023Updated 2 years ago
- Visualize cancer genomes with FAIR single-cell RNA-seq data☆13Jan 5, 2023Updated 3 years ago
- Post hoc cell type classification of single-cell RNA-sequencing data.☆11Oct 5, 2021Updated 4 years ago