Archetypal Analysis network (AAnet)
☆41Jan 30, 2025Updated last year
Alternatives and similar repositories for AAnet
Users that are interested in AAnet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- TensorFlow-Implementation of Deep Archetypal Analysis☆12Aug 4, 2021Updated 5 years ago
- Single-cell archetypal analysis neural network☆15May 27, 2022Updated 4 years ago
- Python package that implements the PCHA algorithm for Archetypal Analysis by Mørup et. al.☆47Aug 28, 2025Updated last year
- Gene Set Scoring on the Nearest Neighbor Graph (gssnng) for Single Cell RNA-seq (scRNA-seq) using AnnData h5ad files.☆12Oct 1, 2024Updated 2 years ago
- generalized principal component analysis (GLM-PCA) implemented in python☆65Feb 1, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Version 2.1.0 released☆23Sep 16, 2019Updated 7 years ago
- Source code and data supporting "Evaluating measures of association for single-cell transcriptomics"☆17Feb 25, 2019Updated 7 years ago
- Template repository for creating novel models with scvi-tools☆20Jan 18, 2023Updated 3 years ago
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Jul 15, 2022Updated 4 years ago
- Sanger Cellular Genetics single-cell ATAC-seq pipeline.☆13Aug 25, 2023Updated 3 years ago
- ☆12Jul 6, 2023Updated 3 years ago
- ☆16Mar 22, 2026Updated 6 months ago
- ☆13Sep 30, 2024Updated 2 years ago
- ☆31Oct 7, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Marker Selection by matching manifolds and elastic net☆23Oct 22, 2024Updated last year
- ☆11Apr 26, 2021Updated 5 years ago
- ☆11Jun 29, 2021Updated 5 years ago
- Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019☆18Jul 5, 2019Updated 7 years ago
- interactive visualization of single-cell transcriptomes☆11Mar 10, 2026Updated 7 months ago
- ☆16Apr 29, 2024Updated 2 years ago
- Contrastive Poisson latent variable models (CPLVMs)☆11Feb 7, 2022Updated 4 years ago
- ☆11Jan 7, 2020Updated 6 years ago
- ☆18Dec 22, 2017Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- DeepLoop robustly identifies enhancer-promoter interactions from low-depth and single-cell Hi-C data☆38Apr 1, 2025Updated last year
- detecting spatial patterns of allele-specific expression☆11May 22, 2024Updated 2 years ago
- ☆99Jan 27, 2021Updated 5 years ago
- eQTLHap: a comprehensive eQTL analysis tool.☆11Apr 15, 2021Updated 5 years ago
- ☆12Aug 21, 2025Updated last year
- Simplified script for applying the t-SNE diff method on high parameter flow cytometry data☆10Oct 31, 2023Updated 2 years ago
- Riemannian metrics to measure distances in latent space of VAEs☆14Jan 7, 2019Updated 7 years ago
- Gaussian process regression package for counts data with negative binomial and zero-inflated negative binomial likelihoods☆25Feb 24, 2025Updated last year
- UNCURL is a tool for single cell RNA-seq data analysis.☆15Jun 27, 2022Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- BiomeNED main code☆12Jul 25, 2019Updated 7 years ago
- Models and datasets for perturbational single-cell omics☆185Aug 19, 2022Updated 4 years ago
- Natural Language-Based Synthetic Data Generation for Cluster Analysis.☆18Feb 23, 2025Updated last year
- Pipeline for designing custom probes against human genes☆24Jan 30, 2026Updated 8 months ago
- Imputation of single cell RNA-sequencing data with autoencoder☆16Jun 23, 2021Updated 5 years ago
- single cell Gene co-Expression Network Analysis☆10Sep 6, 2022Updated 4 years ago
- mbImpute: an accurate and robust imputation method for microbiome data☆13Aug 19, 2021Updated 5 years ago