Trajectory Inference Based on SNP information.
☆24Jun 19, 2024Updated last year
Alternatives and similar repositories for tbsp
Users that are interested in tbsp are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆28Jul 5, 2020Updated 5 years ago
- CellPhy: accurate and fast probabilistic inference of single-cell phylogenies☆20Jan 8, 2026Updated 3 months ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆33Jan 30, 2026Updated 2 months ago
- Version 2.1.0 released☆23Sep 16, 2019Updated 6 years ago
- ☆14Mar 8, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Demultiplexing pooled scRNA-seq data with or without genotype reference☆98Apr 11, 2025Updated last year
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated last week
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆83Jun 9, 2022Updated 3 years ago
- ☆10Sep 27, 2022Updated 3 years ago
- SClineager: a Bayesian hierarchical model that performs lineage tracing of single cells based on genetic markers☆10Apr 30, 2024Updated last year
- scMatch: a single-cell gene expression profile annotation tool using reference datasets☆21Aug 11, 2020Updated 5 years ago
- R package☆27Aug 16, 2020Updated 5 years ago
- Gene Set Enrichment Analysis in Python☆11Oct 26, 2018Updated 7 years ago
- SCCNV: a software tool for identifying copy number variation from single-cell whole-genome sequencing☆13Jul 21, 2020Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- software to detect doublets☆97Dec 28, 2024Updated last year
- COMUNET: a tool to explore and visualize intercellular communication☆12Apr 15, 2020Updated 5 years ago
- ☆12Apr 13, 2020Updated 5 years ago
- Reconstruction of complex single-cell trajectories using CellRouter☆46Dec 14, 2018Updated 7 years ago
- ☆24Sep 29, 2025Updated 6 months ago
- COMET Single-Cell Marker Detection tool☆33Jun 21, 2022Updated 3 years ago
- Clone identification from single-cell data☆63Nov 10, 2022Updated 3 years ago
- ☆12Oct 31, 2020Updated 5 years ago
- ☆34Jun 7, 2019Updated 6 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Single-cell Bisulfite Sequencing Data Mapping☆12May 19, 2021Updated 4 years ago
- Toolkit for single-cell analysis of chromatin accessibility☆12Feb 27, 2020Updated 6 years ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Sep 14, 2018Updated 7 years ago
- Code repository for the Tumor Immune Cell Atlas (TICA) project☆63Mar 31, 2022Updated 4 years ago
- MarcoPolo is a clustering-free approach to the exploration of bimodally expressed genes along with group information in single-cell RNA-s…☆20Nov 17, 2024Updated last year
- Pipeline for SpatialTranscriptomics and 10X Visium data☆22Jul 22, 2025Updated 8 months ago
- ☆12Sep 20, 2019Updated 6 years ago
- Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces☆40Sep 17, 2021Updated 4 years ago
- Single Cell Caller (SCcaller) - Identify single nucleotide variations (SNVs) from single cell sequencing data☆36Nov 27, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- iS-CellR: interactive graphical tool for analysis of single-cell RNAseq data☆24Oct 9, 2019Updated 6 years ago
- Identified novel mouse spermatogenesis biomarkers based on single-cell RNA sequencing data☆11Jun 7, 2022Updated 3 years ago
- Statistical approach for removing unwanted variation from multiple single-cell datasets☆71Apr 12, 2024Updated last year
- Hera-T, a fast and accurate tool for estimating gene abundances in single cell data generated by the 10X-Chromium protocol☆18Nov 9, 2021Updated 4 years ago
- ☆19Sep 15, 2020Updated 5 years ago
- ☆27Sep 2, 2021Updated 4 years ago
- A simple, intuitive and Efficient single cell binary Data Storage format☆15Oct 10, 2019Updated 6 years ago