Codes for our paper "Single-Cell RNA-Seq Reveals Dynamic Early Embryonic-like Programs during Chemical Reprogramming" published by Cell Stem Cell at year 2018
☆11Sep 5, 2020Updated 5 years ago
Alternatives and similar repositories for CSC2018
Users that are interested in CSC2018 are comparing it to the libraries listed below
Sorting:
- single cell and bulk RNASeq analysis scripts☆14Jan 13, 2022Updated 4 years ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- Data visualization with R☆12Dec 12, 2020Updated 5 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated last year
- ☆10Feb 25, 2024Updated 2 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 2 years ago
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- STAR, cufflinks, cluster, DESeq2, GO analysis☆14Jun 27, 2020Updated 5 years ago
- Statistical and computational analysis of the human genome☆15Sep 22, 2021Updated 4 years ago
- Small and simple scripts useful for various bioinformatics purposes e.g. extract sequences from fasta files, rename fasta files (prefix a…☆22Oct 21, 2025Updated 4 months ago
- ☆24Nov 9, 2017Updated 8 years ago
- Repository☆10Oct 23, 2024Updated last year
- bioinformatics learning☆13Oct 10, 2023Updated 2 years ago
- 在R语言 中使用ChatGPT（中国大陆版）☆12Mar 17, 2023Updated 2 years ago
- Westlake BioBank for Chinese pilot project☆10May 17, 2023Updated 2 years ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Updated this week
- Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUS☆10Jul 20, 2017Updated 8 years ago
- ☆10Jan 30, 2020Updated 6 years ago
- ☆10Dec 2, 2025Updated 2 months ago
- A collection of python and bash scripts for various bioinformatics-related tasks☆12Sep 19, 2024Updated last year
- Base CRUK Cambridge Institute RNAseq Course☆21Aug 30, 2019Updated 6 years ago
- Repository to reproduce analyses from the GTEx V6P Rare Variation Manuscript☆17Nov 13, 2017Updated 8 years ago
- RAPToR (Real Age Prediction from Transcriptome staging on Reference) is a tool to accurately predict individual samples' developmental ag…☆23Mar 29, 2023Updated 2 years ago
- scripts for RNA-Seq analysis☆28Feb 20, 2022Updated 4 years ago
- Toy files and training material to introduce Linux to molecular biologists☆22Jul 21, 2023Updated 2 years ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 6 years ago
- Heritability Estimation with high Efficiency using LD and Summary Statistics☆13Feb 14, 2024Updated 2 years ago
- ☆10Apr 13, 2022Updated 3 years ago
- An R package for plotting GWAS results from the GAPIT package☆14Oct 9, 2025Updated 4 months ago
- Standard operating procedures for H3ABionet data processing and analyses☆11Aug 30, 2021Updated 4 years ago
- Pipeline for eukaryotic genome annotation based on external evidences☆14Feb 23, 2023Updated 3 years ago
- scripts used for processing and analyzing data in the article.☆13Oct 31, 2019Updated 6 years ago
- My attempts at recreating the visualisations by W.E.B. DuBois as part of the DuBois Challenge.☆11Jan 5, 2023Updated 3 years ago
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 5 years ago
- ☆13Sep 7, 2022Updated 3 years ago
- My submissions for the #30DayChartChallenge held on April 2022☆14May 11, 2022Updated 3 years ago
- Contributions to the #30daychartchallenge☆10Apr 10, 2025Updated 10 months ago
- shared scripts in Lu Lab @ Tsinghua University☆14Nov 7, 2018Updated 7 years ago
- Cool Bioinformatics Scripts☆12May 21, 2024Updated last year