davidrequena / DESeq2Links
Guide for the Differential Expression Analysis of RNAseq data using DESeq2
☆23Updated 6 years ago
Alternatives and similar repositories for DESeq2
Users that are interested in DESeq2 are comparing it to the libraries listed below
Sorting:
- An R interface to the MEME Suite☆52Updated 2 months ago
- R package wrapping bedtools☆42Updated 5 months ago
- Detecting intron retention from RNA-Seq experiments☆55Updated last year
- Arabidopsis RNA_-seq downstream analysis shiny app☆30Updated 6 years ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 7 years ago
- R package for bcbio RNA-seq analysis.☆62Updated 11 months ago
- reproduce the functional enrichment analysis presented in GTEx paper using clusterProfiler/DOSE☆33Updated 4 years ago
- Website for the precision medicine workshop☆45Updated last month
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 6 years ago
- documentation for trackViewer☆29Updated 6 years ago
- Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data☆15Updated 7 years ago
- RNA-seq Quantification of Alternative Polyadenylation☆47Updated last month
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆30Updated 5 months ago
- ATAC-seq snakemake pipeline☆88Updated 5 years ago
- Repo for Physalia course Analysis of Single Cell RNA-Seq data☆32Updated 5 years ago
- An integrated R package to evaluate periodicity in large scale data☆28Updated 2 years ago
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆59Updated 5 years ago
- Scripts to import your FeatureCounts output into DEXSeq☆34Updated 6 years ago
- Create KEGG.db Package☆61Updated 2 years ago
- Summer school course materials collection☆27Updated 7 years ago
- ☆61Updated 4 years ago
- A pipeline for differential expression and differential alternative splicing analysis☆66Updated last year
- collection of notebooks with different cytoscape workflows☆50Updated 2 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated 10 months ago
- Tutorial for AMSI BioInfoSummer 2018☆29Updated 6 years ago
- R package for genomic feature analysis and visualization☆79Updated 4 months ago
- This github repository contains code to reproduce the analysis in our paper "Variability in estimated gene expression among commonly used…☆28Updated last year
- GREAT Analysis - Functional Enrichment on Genomic Regions☆90Updated 5 months ago
- Workshop • Analysis of RNA-seq data☆36Updated last year
- GENome Organisation Visual Analytics☆79Updated 7 months ago