mikelove / deseq2_or_edgerLinks
DESeq2 or edgeR
☆22Updated 8 years ago
Alternatives and similar repositories for deseq2_or_edger
Users that are interested in deseq2_or_edger are comparing it to the libraries listed below
Sorting:
- Glimma R package☆50Updated last year
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated 11 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated 2 weeks ago
- Identify and correct invalid gene symbols☆59Updated 10 months ago
- Transcript quantification import with automatic metadata detection☆67Updated last week
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated 5 years ago
- Functional enrichment analysis of high-throughput omics data☆20Updated 8 months ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- A tidy interface for coverage analysis☆30Updated 5 years ago
- Statistical power studies for multi-omics experiments.☆32Updated 8 months ago
- A R package for Grade of Membership model and Visualization of counts data:☆32Updated 4 years ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆66Updated last month
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆22Updated 2 months ago
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆30Updated 6 months ago
- Differential Count Data Analysis Toolbox☆61Updated last year
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated 10 months ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Updated 2 years ago
- Devel repository for minfi☆61Updated last year
- Workshop for CNV analysis with Bioconductor☆17Updated 8 months ago
- ☆62Updated 6 months ago
- R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing☆61Updated 4 months ago
- Independent Hypothesis Weighting☆15Updated last year
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Read HOMER motif analysis output in R.☆17Updated 7 years ago
- Explore design matrices interactively with R/Shiny☆37Updated 5 months ago
- Bioconductor package for management of multi-assay data☆72Updated last month