mikelove / deseq2_or_edgerLinks
DESeq2 or edgeR
☆22Updated 9 years ago
Alternatives and similar repositories for deseq2_or_edger
Users that are interested in deseq2_or_edger are comparing it to the libraries listed below
Sorting:
- Glimma R package☆50Updated last year
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- Transcript quantification import with automatic metadata detection☆67Updated 2 weeks ago
- Functional enrichment analysis of high-throughput omics data☆20Updated 9 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- Devel repository for minfi☆61Updated last year
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Updated 2 years ago
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆52Updated 2 years ago
- Statistical power studies for multi-omics experiments.☆32Updated 9 months ago
- Differential Count Data Analysis Toolbox☆61Updated last year
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Independent Hypothesis Weighting☆15Updated 2 years ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated last month
- R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing☆61Updated 5 months ago
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- Identify and correct invalid gene symbols☆59Updated 11 months ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆43Updated this week
- A tidy interface for coverage analysis☆31Updated 5 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆32Updated 4 years ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆22Updated 2 years ago
- Explore design matrices interactively with R/Shiny☆37Updated 3 weeks ago
- MSigDB gene sets for multiple organisms in a tidy data format☆83Updated 3 months ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆24Updated 3 months ago
- Read HOMER motif analysis output in R.☆17Updated 7 years ago
- Representation and manipulation of genomic intervals☆46Updated this week
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆31Updated 2 months ago