R package with Shiny application for DGE analysis
☆12Jan 8, 2024Updated 2 years ago
Alternatives and similar repositories for dgeAnalysis
Users that are interested in dgeAnalysis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- classification of higher-order structural variants from breakpoint data☆11Jan 8, 2018Updated 8 years ago
- Make rapid visualizations of RNA-seq data in R☆20Oct 7, 2025Updated 5 months ago
- miRTrace☆11Jun 14, 2023Updated 2 years ago
- Detection of CNVs (deletion/duplication) in target panel based NGS data☆16May 23, 2023Updated 2 years ago
- Differential gene expression analysis on RNA-seq data☆13Apr 26, 2024Updated last year
- Autonomous and accurate clustering of co-localized ion images in a self-supervised manner.☆11Dec 22, 2021Updated 4 years ago
- Random collection of bioinformatics thingies☆19Mar 13, 2016Updated 10 years ago
- Targeted Amplicon Bisulfite Sequencing Analysis Tool☆11May 8, 2019Updated 6 years ago
- Nextflow pipeline that runs DESeq2 on data processed with the nextflow RNAseq pipeline☆13Dec 2, 2025Updated 3 months ago
- ☆29Sep 28, 2021Updated 4 years ago
- Human embryonic cell altas☆13Dec 31, 2019Updated 6 years ago
- Repository for MetaboShiny, a novel R and RShiny based metabolomics data analysis package.☆17Feb 13, 2026Updated last month
- Benchmarking of aligners and variant callers for Whole Exome Sequencing data☆20Dec 4, 2018Updated 7 years ago
- Python CLI for alignment-free genomics.☆13Feb 11, 2026Updated last month
- This RNAseq data analysis tutorial is created for educational purpose☆34Feb 18, 2026Updated last month
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Dec 15, 2021Updated 4 years ago
- High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants☆22Mar 27, 2020Updated 5 years ago
- ☆16May 25, 2021Updated 4 years ago
- Flexible Bayesian inference of mutational signatures☆41Jan 30, 2023Updated 3 years ago
- Publication Page for the Noack et al. 2021 Nature Neuroscience paper☆10Feb 7, 2022Updated 4 years ago
- ☆31Jun 10, 2025Updated 9 months ago
- Python argparse skeleton☆10Feb 9, 2021Updated 5 years ago
- ☆14Nov 13, 2022Updated 3 years ago
- ☆10Dec 4, 2023Updated 2 years ago
- ☆10Aug 29, 2012Updated 13 years ago
- Script to automate differential expression analysis using DESeq2, edgeR or limma-voom☆20Aug 22, 2018Updated 7 years ago
- Biopet docs☆17Aug 2, 2018Updated 7 years ago
- ☆61Mar 23, 2021Updated 5 years ago
- Causal Structure Learning and Network Analysis with Structural Equation Modeling.☆24Dec 18, 2025Updated 3 months ago
- ☆15Mar 10, 2026Updated last week
- ☆21Dec 23, 2024Updated last year
- Scripts supporting identification of genomic features affecting survival time in cancer☆12Dec 6, 2018Updated 7 years ago
- jupyter notebook; perform differential gene expression analysis using DESeq2 on TCGA RNAseq data☆33Mar 1, 2019Updated 7 years ago
- Workshop content for http://dib-training.readthedocs.org/en/pub/2016-01-13-adv-beg-shell.html☆13Feb 23, 2018Updated 8 years ago
- Readme☆10Mar 15, 2020Updated 6 years ago
- A clusterability measure for scRNA-seq data.☆18Feb 2, 2022Updated 4 years ago
- Clone of the Bioconductor repository for the batchelor package.☆18Mar 13, 2025Updated last year
- Lightweight workflows in bioinformatics:☆24Nov 5, 2014Updated 11 years ago
- R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)☆24May 12, 2025Updated 10 months ago