Easy and comprehensive biological network reconstruction and analysis
☆38Sep 8, 2026Updated last month
Alternatives and similar repositories for BioNERO
Users that are interested in BioNERO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A bioinformatics toolset for multiomic analysis☆22Aug 17, 2026Updated 2 months ago
- This R package for performing module repertoire analyses and generating fingerprint representations☆19Sep 16, 2021Updated 5 years ago
- A set of processes/pipelines for bioinformatics☆15Updated this week
- Supplementary information for "Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcript…☆11Jan 15, 2024Updated 2 years ago
- Multiple trajectory alignment of time-series data☆13Oct 14, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ExTraMapper is a tool to find Exon and Transcript-level Mappings of a given pair of orthologous genes between two organisms using sequenc…☆12Apr 20, 2022Updated 4 years ago
- heatmap3 is an improved heatmap package. It is completely compatible with the original R function heatmap, and provides some more powerfu…☆11Sep 2, 2021Updated 5 years ago
- This repository contains code associated with the study "Proteomic signatures improve risk predictions for common and rare diseases" (DOI…☆20Jul 3, 2024Updated 2 years ago
- Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing☆21Nov 18, 2025Updated 11 months ago
- HomBlocks: A multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching☆36Aug 7, 2017Updated 9 years ago
- R client for the OmniPath web service☆176Updated this week
- AnceTran2.0: R package for transcriptome evolution analysis based on RNA-seq expression data or ChIP-seq TF-binding data☆12May 19, 2019Updated 7 years ago
- Multi-omics multi-layered network integration and interpretation☆15Oct 15, 2024Updated 2 years ago
- ☆14Feb 21, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆37Sep 11, 2025Updated last year
- popsicleR, a flexible R package aimed at providing most of the necessary quality controls and preliminary information for complete and de…☆25Dec 3, 2025Updated 10 months ago
- Cell clustering and communication network inference for single-cell transcriptomics☆14Sep 18, 2024Updated 2 years ago
- Network analysis for multi-omics☆124May 24, 2026Updated 4 months ago
- ☆11Mar 30, 2024Updated 2 years ago
- Homologizer: phasing gene copies into polyploid subgenomes☆13Feb 3, 2026Updated 8 months ago
- An R package for comparative transcriptomic analyses of hybrids and their progenitors☆18Sep 5, 2024Updated 2 years ago
- Generate Novel Insights from Gene Correlation Data☆14Jun 27, 2022Updated 4 years ago
- ☆17Aug 31, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Methods to discover gene programs on single-cell data☆211Updated this week
- GSEA plots in ggplot2☆10Jan 21, 2024Updated 2 years ago
- Mosaic single cell data integration using non-overlapping features☆40Sep 20, 2022Updated 4 years ago
- R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.☆25Oct 6, 2026Updated last week
- ☆49Oct 29, 2025Updated 11 months ago
- RAPToR (Real Age Prediction from Transcriptome staging on Reference) is a tool to accurately predict individual samples' developmental ag…☆25Mar 29, 2023Updated 3 years ago
- Useful Utilities for Statistics and Visualization.☆33Jun 26, 2025Updated last year
- ☆10Sep 2, 2024Updated 2 years ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆15Apr 12, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆38Jul 1, 2024Updated 2 years ago
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated 2 years ago
- Inferring CNV data from single cell ATAC seq☆29Jun 24, 2025Updated last year
- Cell type prioritization in single-cell data☆153Mar 26, 2026Updated 6 months ago
- ☆176Jul 3, 2024Updated 2 years ago
- Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease☆17Mar 23, 2024Updated 2 years ago
- Drawing 'dendrogram' using 'ggtree'☆13Apr 29, 2026Updated 5 months ago