Easy and comprehensive biological network reconstruction and analysis
☆36Sep 15, 2025Updated 7 months ago
Alternatives and similar repositories for BioNERO
Users that are interested in BioNERO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A set of processes/pipelines for bioinformatics☆15Apr 29, 2026Updated last week
- This repository contains code associated with the study "Proteomic signatures improve risk predictions for common and rare diseases" (DOI…☆19Jul 3, 2024Updated last year
- This R package for performing module repertoire analyses and generating fingerprint representations☆18Sep 16, 2021Updated 4 years ago
- ☆14Feb 21, 2023Updated 3 years ago
- ☆11Mar 30, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- R client for the OmniPath web service☆164Apr 29, 2026Updated last week
- HomBlocks: A multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching☆36Aug 7, 2017Updated 8 years ago
- Human Muscle Ageing Cell Atlas☆21Mar 8, 2024Updated 2 years ago
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated last year
- Multiple trajectory alignment of time-series data☆13Oct 14, 2023Updated 2 years ago
- Drawing 'dendrogram' using 'ggtree'☆13Apr 29, 2026Updated last week
- a computational framework to identify and characterize cell niches from spatial omics data at single-cell resolution☆53Aug 11, 2025Updated 8 months ago
- A package that performs cell type annotations on single cell resolution of spatial transcriptomics data, find the niche interactions and …☆14Dec 5, 2025Updated 5 months ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆107May 27, 2025Updated 11 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Network analysis for multi-omics☆107Apr 28, 2026Updated last week
- Methods to discover gene programs on single-cell data☆182Apr 1, 2026Updated last month
- Scripts for bioinformatics data processing and analysis☆12Nov 7, 2023Updated 2 years ago
- Multifastats: Multi-Fasta Sequence Stats. Free python-based program that, from a set of a set of 'fasta' sequences (as group or individua…☆11Feb 21, 2018Updated 8 years ago
- Hapmap-v1☆12Feb 3, 2020Updated 6 years ago
- Guide for the Differential Expression Analysis of RNAseq data using DESeq2☆25Nov 14, 2018Updated 7 years ago
- ☆23Mar 29, 2023Updated 3 years ago
- Scripts from the GBM cellular states paper☆21Feb 24, 2021Updated 5 years ago
- popsicleR, a flexible R package aimed at providing most of the necessary quality controls and preliminary information for complete and de…☆25Dec 3, 2025Updated 5 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- BioTIP: Biological Tipping-Point Identification and Characterization☆24Oct 20, 2025Updated 6 months ago
- This repository contains the source code of the R package for EvoGeneX, a software to infer the mode of evolution from the gene expressio…☆29Dec 1, 2025Updated 5 months ago
- Multi-omics multi-layered network integration and interpretation☆14Oct 15, 2024Updated last year
- All data and notebook for my 2020 scRNA-seq analysis workshop☆18Jul 27, 2020Updated 5 years ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆33Sep 11, 2025Updated 7 months ago
- Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms☆49Oct 22, 2025Updated 6 months ago
- An R package for ECM molecule annotation, classification, and analysis☆14Sep 20, 2024Updated last year
- ☆20Mar 28, 2021Updated 5 years ago
- ☆16Apr 3, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- GASTON: deep learning algorithm learns "topography" of a tissue slice from spatial transcriptomics data☆71Dec 1, 2025Updated 5 months ago
- Beginning of a textbook for shell skills for bioinformatics☆11Oct 7, 2025Updated 7 months ago
- R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.☆19Apr 29, 2026Updated last week
- R bindings to system utilities found in most Unix systems☆22Apr 23, 2026Updated 2 weeks ago
- ☆49Oct 29, 2025Updated 6 months ago
- Cell type prioritization in single-cell data☆140Mar 26, 2026Updated last month
- ATAC_seq Workshop☆13Feb 16, 2018Updated 8 years ago