sqjin / CellChatShinyLinks
Standalone shiny server container for viewing CellChat object
☆12Updated 4 years ago
Alternatives and similar repositories for CellChatShiny
Users that are interested in CellChatShiny are comparing it to the libraries listed below
Sorting:
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 3 years ago
- scWGCNA☆61Updated 2 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated 8 months ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 3 months ago
- Bostongene cell deconvolution algorithm from RNAseq☆56Updated last year
- R package for robust clustering of single cell RNA sequencing data☆35Updated last year
- ☆39Updated 4 years ago
- R package for Pathway RespOnsive GENe activity inference☆107Updated 2 years ago
- ☆32Updated 4 years ago
- scRNA-seq cell type identification☆43Updated 5 years ago
- A unified interface to spatial transcriptomics deconvolution tools☆43Updated this week
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆85Updated 2 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆27Updated 3 years ago
- Single-cell Case Control Analysis☆51Updated 9 months ago
- SCDC☆45Updated last month
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆56Updated 2 years ago
- The codes and files for the study of subsolid nodules (SSN).☆15Updated 4 years ago
- Code repository for single cell RNA-seq☆36Updated 4 years ago
- ☆58Updated last year
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 2 years ago
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- ☆63Updated 4 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 4 years ago
- ☆47Updated last year
- Aligning gene expression trajectories of single-cell reference and query systems☆73Updated 9 months ago
- Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs☆38Updated last year
- Code repository for the Tumor Immune Cell Atlas (TICA) project☆64Updated 3 years ago