TomKellyGenetics / graphsim
R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)
☆24Updated 2 years ago
Alternatives and similar repositories for graphsim:
Users that are interested in graphsim are comparing it to the libraries listed below
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆18Updated last week
- ☆12Updated 9 months ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 5 years ago
- Clone of the Bioconductor repository for the scRNAseq package.☆24Updated 3 weeks ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆25Updated last year
- Explore the cancer relevance of your gene list☆49Updated 5 months ago
- Single-cell Scalable Visualization and Analytics☆25Updated 5 years ago
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆21Updated 3 years ago
- processes GoT amplicon data and generates a table of metrics☆27Updated 2 years ago
- CellAnn☆12Updated last year
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 2 years ago
- Cancer Dependency Map package☆26Updated 6 months ago
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆29Updated 5 years ago
- Pathway-based trajectory inference method for time-series scRNAseq data☆25Updated 3 years ago
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Updated 3 years ago
- Dynamic models for single-cell RNA-seq time series.☆39Updated 6 years ago
- ☆15Updated 4 years ago
- ☆42Updated 3 months ago
- ☆17Updated 9 months ago
- Course Materials for Genomics Data Mining☆22Updated last week
- GEO RNA-seq Experiments Processing Pipeline☆21Updated 5 years ago
- ☆62Updated 3 months ago
- Human brain, >200,000 nuclei☆24Updated 3 years ago
- Shiny app for the analysis of single cell data☆26Updated last month
- Gene-level general linear mixed model☆19Updated 3 weeks ago
- Interpretation of RNAseq experiments through robust, efficient comparison to public databases☆16Updated 3 months ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆15Updated 3 years ago
- Dimensionality reduction and batch integration methods for single cell data☆16Updated 2 years ago
- A General Framework for Consensus Partitioning☆61Updated last week
- Comparison of dimensionality reduction methods☆30Updated 4 years ago