TomKellyGenetics / graphsimLinks
R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)
☆24Updated 3 weeks ago
Alternatives and similar repositories for graphsim
Users that are interested in graphsim are comparing it to the libraries listed below
Sorting:
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆26Updated last year
- ☆12Updated last year
- Explore the cancer relevance of your gene list☆51Updated 3 months ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…☆27Updated 2 months ago
- Comparison of dimensionality reduction methods☆30Updated 5 years ago
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆23Updated 4 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 6 years ago
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆22Updated 4 months ago
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆30Updated 3 weeks ago
- CellAnn☆12Updated last year
- A General Framework for Consensus Partitioning☆61Updated 3 months ago
- Clone of the Bioconductor repository for the basilisk package.☆27Updated 2 weeks ago
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆18Updated last month
- XEnograft Visualization & Analysis☆11Updated 2 months ago
- ☆17Updated last year
- Gene-level general linear mixed model☆21Updated 4 months ago
- An automated pipe for reproducible RNA-seq analysis with the minimal efforts from researchers. You only need to provide the taxa name and…☆14Updated 3 years ago
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- tools in python and R for analyzing biological count data, especially from single cell RNAseq☆22Updated last year
- Inferring gene co-expression networks from single cell gene expression data☆24Updated 2 years ago
- Interpretation of RNAseq experiments through robust, efficient comparison to public databases☆16Updated 2 weeks ago
- Toolbox package for organizing and working with TCGA data☆27Updated last month
- The KEGGgraph package to parse KEGG pathways in R into graph objects☆13Updated last month
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- Course Materials for Genomics Data Mining☆22Updated this week
- Assessing the increase in power from increasing read depth in a given RNA-Seq study☆13Updated 6 years ago
- Repository for supplemental material of manuscripts☆18Updated 3 years ago
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆21Updated 3 years ago
- Statistical power studies for multi-omics experiments.☆31Updated 4 months ago