TomKellyGenetics / graphsimLinks
R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)
☆24Updated 8 months ago
Alternatives and similar repositories for graphsim
Users that are interested in graphsim are comparing it to the libraries listed below
Sorting:
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆28Updated 2 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Updated 4 years ago
- The KEGGgraph package to parse KEGG pathways in R into graph objects☆14Updated 9 months ago
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆23Updated last week
- Multi-omics data normalisation, model fitting and visualisation.☆27Updated 2 years ago
- Toolbox package for organizing and working with TCGA data☆28Updated last month
- Quickomics: exploring omics data in an intuitive, interactive and informative manner. Bioinformatics. 2021 Apr 26:btab255.☆42Updated 2 weeks ago
- FELLA: an R package for Metabolomics data enrichment through diffusion☆23Updated 2 weeks ago
- Prioritizing Cancer Driver Genes Using Genomics Data☆17Updated last month
- ☆17Updated last year
- This is the ensembldb development repository.☆36Updated 5 months ago
- Template for building a bioconductor workshop package using github actions☆21Updated 7 months ago
- Explore the cancer relevance of your gene list☆52Updated last month
- R/Shiny package for network-integrated pathway enrichment analysis☆13Updated 5 years ago
- Open-Source Software for Omic Data Analysis and Visualization☆40Updated 3 weeks ago
- GEO RNA-seq Experiments Processing Pipeline☆22Updated 6 years ago
- Single Cell multimodal data scripts for downloading datasets☆17Updated 2 months ago
- An automated pipe for reproducible RNA-seq analysis with the minimal efforts from researchers. You only need to provide the taxa name and…☆14Updated 3 years ago
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- Gene-level general linear mixed model☆24Updated 4 months ago
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data☆16Updated 4 years ago
- Interactive benchmarking of ranking and assignment methods☆16Updated last month
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- Tutorial for the analysis of scRNA-seq data in R☆18Updated 7 years ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆65Updated last month
- Bayesian modelling of DNA methylation heterogeneity at single-cell resolution☆24Updated 2 years ago
- Interpretation of RNAseq experiments through robust, efficient comparison to public databases☆16Updated 3 months ago
- Dimensionality reduction and batch integration methods for single cell data☆16Updated 2 years ago
- Cancer Dependency Map package☆33Updated last year