TomKellyGenetics / graphsimLinks
R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)
☆24Updated 6 months ago
Alternatives and similar repositories for graphsim
Users that are interested in graphsim are comparing it to the libraries listed below
Sorting:
- ☆17Updated last year
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Updated 4 years ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆28Updated 2 years ago
- Toolbox package for organizing and working with TCGA data☆28Updated this week
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Quickomics: exploring omics data in an intuitive, interactive and informative manner. Bioinformatics. 2021 Apr 26:btab255.☆42Updated this week
- R/Shiny package for network-integrated pathway enrichment analysis☆13Updated 4 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- Cancer Dependency Map package☆30Updated last year
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆22Updated 3 weeks ago
- The KEGGgraph package to parse KEGG pathways in R into graph objects☆14Updated 7 months ago
- Explore the cancer relevance of your gene list☆52Updated last month
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆29Updated 2 years ago
- Gene-level general linear mixed model☆23Updated last month
- Code associated with MIX-seq manuscript☆15Updated 5 years ago
- Template for building a bioconductor workshop package using github actions☆21Updated 4 months ago
- Dimensionality reduction and batch integration methods for single cell data☆16Updated 2 years ago
- Multi-omics data normalisation, model fitting and visualisation.☆28Updated 2 years ago
- Summary statistics for repertoires☆17Updated 2 years ago
- Learn tissue-specificity and tissue-sharing of genetic regulation across 49 tissues using constraint matrix factorization model☆22Updated 5 years ago
- Scalable Tool for Gene Network Reverse Engineering☆24Updated last week
- GEO RNA-seq Experiments Processing Pipeline☆21Updated 6 years ago
- Full annotation using shape-constrained trees☆27Updated 2 years ago
- This is the ensembldb development repository.☆35Updated 2 months ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )