Performance-critical tools to manipulate, analyze, and process genomic interval data
☆27Apr 20, 2026Updated last week
Alternatives and similar repositories for gtars
Users that are interested in gtars are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Genomic interval machine learning☆22Mar 11, 2026Updated last month
- VEP-like tool for sequence ontology and HGVS annotation of VCF files☆27Apr 24, 2026Updated last week
- A Rust library and command line tool for working with genomic ranges and their data.☆100May 29, 2024Updated last year
- Modular job submitter for arbitrary pipelines or commands.☆26Apr 11, 2026Updated 3 weeks ago
- List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.☆12Jun 5, 2018Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- bedtools-like functionality for interval sets in rust☆55Aug 5, 2025Updated 8 months ago
- Highly informative TCR representation model☆16Nov 26, 2025Updated 5 months ago
- ☆23Dec 19, 2025Updated 4 months ago
- single-cell decorrelated module networks☆31Aug 24, 2024Updated last year
- Equivariant layers for RC-complement symmetry in DNA sequence data☆12Feb 24, 2022Updated 4 years ago
- A high-performance search engine for large-scale genomic interval datasets☆20Sep 1, 2021Updated 4 years ago
- A high-performance BigWig and BigBed library in Rust☆114Feb 13, 2026Updated 2 months ago
- Tools for the analysis of heterogeneous tissues☆14Aug 24, 2022Updated 3 years ago
- UMAP (Uniform Manifold Approximation and Projection) in Rust☆22Apr 24, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated last year
- Command line tools for IntSpan related bioinformatics operations☆12Apr 9, 2025Updated last year
- A web API and database for biological sample metadata☆22Apr 19, 2026Updated 2 weeks ago
- Nextflow pipeline to convert BAM to FASTQ, align, perform QC, assess targeted coverage, call gSNP, call sSNV, call mtSNV, call SVs, call …☆18Nov 24, 2025Updated 5 months ago
- Implicit Interval Tree with Interpolation Index☆42Jul 13, 2022Updated 3 years ago
- A fast terminal-based viewer and command-line toolkit for molecular sequences (DNA, AA). View, translate, convert (to FASTA), and combine…☆39Mar 10, 2026Updated last month
- Fast API server for calculating linkage disequilibrium☆20Apr 24, 2025Updated last year
- ☆15Feb 28, 2025Updated last year
- R and MATLAB scripts for MAGICAL☆11Jun 26, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Important papers relating to the biology of cell free DNA☆19Sep 21, 2018Updated 7 years ago
- Tensorflow implementation for the Class-wise Selective Rationalization☆14Feb 15, 2023Updated 3 years ago
- Java REST API for iRODS☆12Nov 9, 2023Updated 2 years ago
- Fast interval intersection library☆44Aug 20, 2025Updated 8 months ago
- ☆15Jun 27, 2025Updated 10 months ago
- Statistical Analysis of High Dimensional Data☆14Feb 20, 2026Updated 2 months ago
- This is the repository for the Python based program for automated deep phenotype analysis of clinical information using large language mo…☆28Sep 30, 2025Updated 7 months ago
- Sturgeon is a CNS neural network classifier☆46Jan 22, 2026Updated 3 months ago
- ☆27Jul 2, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Single-cell analysis methods in Rust☆34Nov 4, 2025Updated 5 months ago
- Accelerated, Python-only, single-cell integration benchmarking metrics☆91Apr 23, 2026Updated last week
- A lightweight, alignment-free utility for detecting repeat-containing reads in short-read WGS, WES and RNA-seq data.☆18Jan 16, 2026Updated 3 months ago
- Milton based WebDav interface for iRODS☆12May 9, 2017Updated 8 years ago
- A Rust-Based suite of utilities for ultra-fast genomic feature extraction☆43Dec 18, 2025Updated 4 months ago
- Rust crates for working with Workflow Description Language (WDL) documents.☆62Sep 23, 2025Updated 7 months ago
- A port of biocommons/hgvs to the Rust programming language☆18Updated this week