brentp / geneimpactsLinks
prioritize effects of variant annotations from VEP, SnpEff, et al.
☆34Updated 9 months ago
Alternatives and similar repositories for geneimpacts
Users that are interested in geneimpacts are comparing it to the libraries listed below
Sorting:
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆51Updated 9 months ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- create a gemini-compatible database from a VCF☆56Updated 4 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- ☆36Updated 5 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆30Updated 4 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆25Updated 9 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 5 years ago
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Updated 7 years ago
- A Framework to call Structural Variants from NGS based datasets☆22Updated 7 years ago
- sort genomic data☆36Updated 5 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 2 weeks ago
- robust matching of small variant datasets using flexible scoring schemes☆11Updated 5 years ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated last year
- Numerical Encoding for Human Genetic Variants☆42Updated 2 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- ☆25Updated 4 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆22Updated 3 years ago
- simple library for dealing with SAM cigar strings☆41Updated 4 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- python wrapper to dpryan79's bigwig library using cffi☆19Updated 9 years ago
- conda recipes for genomic data☆84Updated 4 years ago
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆39Updated 2 years ago
- A method to identify structural variation from sequencing data in target regions☆32Updated 4 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 8 years ago
- pythonic wrapper for htslib☆24Updated 8 years ago
- Reference-free variant discovery in large eukaryotic genomes☆41Updated 4 years ago
- Chromatin segmentation in R☆19Updated 7 years ago