A high-performance BigWig and BigBed library in Rust
☆127Aug 14, 2026Updated last month
Alternatives and similar repositories for bigtools
Users that are interested in bigtools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- an API for intersections of genomic data☆149Oct 4, 2026Updated last week
- A Rust library and command line tool for working with genomic ranges and their data.☆103May 29, 2024Updated 2 years ago
- bedtools-like functionality for interval sets in rust☆56Aug 5, 2025Updated last year
- bioinformatics toolkit in rust☆109Aug 16, 2026Updated last month
- Bioinformatics I/O libraries in Rust☆727Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Oxbow makes genomic data ready for high-performance analytics.☆169Sep 21, 2026Updated 3 weeks ago
- Parallel Construction of Suffix Arrays in Rust☆26Updated this week
- a lexicographically-based GTF/GFF sorter☆39Aug 8, 2026Updated 2 months ago
- A rust wrapper for the spoa C++ partial order alignment library☆10Jun 11, 2025Updated last year
- The D4 Quantitative Data Format☆176Nov 28, 2025Updated 10 months ago
- A lightweight reimplementation of some of the algorithms in the MEME suite in Python.☆39Sep 29, 2026Updated last week
- ☆21Dec 26, 2025Updated 9 months ago
- Blazing-Fast Bioinformatic Operations on Python DataFrames☆203Updated this week
- Parsing and evaluating gene annotation and spliced alignment☆29Jul 22, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Performant Pythonic GenomicRanges☆491Sep 23, 2026Updated 2 weeks ago
- expressions on VCFs☆94Sep 25, 2026Updated 2 weeks ago
- Genomic interval operations on Pandas DataFrames☆196Updated this week
- gia: Genomic Interval Arithmetic☆69Aug 21, 2024Updated 2 years ago
- Efficient querying of biological databases☆45Oct 27, 2025Updated 11 months ago
- Rust Backend for PyRanges Operations. More featureful and much faster replacement for the NCLS library☆33Aug 13, 2026Updated last month
- A C library for handling bigWig files☆83Sep 14, 2026Updated 3 weeks ago
- Spiritual successor to picard for sequencing qc☆63Updated this week
- A Rust-Based suite of utilities for ultra-fast genomic feature extraction☆47Dec 18, 2025Updated 9 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A complete diploid human genome☆160Aug 10, 2026Updated 2 months ago
- Fast interval intersection library☆45Oct 1, 2026Updated last week
- Rust implementation of the Haskell Rampart library that determines how intervals relate to each other.☆11Apr 21, 2022Updated 4 years ago
- An extensible and performant aligner and read mapper☆107Sep 15, 2026Updated 3 weeks ago
- ☆32Jun 18, 2026Updated 3 months ago
- a minimal, scriptable genome browser for python☆55Dec 20, 2024Updated last year
- An efficient CLI to extract sequences from the SRA☆132Jun 12, 2026Updated 4 months ago
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Aug 10, 2025Updated last year
- BAM/SAM/CRAM/FASTA reader, pileup engine, BCF/BAM writing☆29Oct 5, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A Rust library for storing generic genomic data by sorted chromosome name☆18Sep 26, 2024Updated 2 years ago
- base-level dotplots from PAF alignments☆36Sep 18, 2025Updated last year
- Genome browser and variant annotation☆400Oct 1, 2026Updated last week
- Per-base per-nucleotide depth analysis☆151May 9, 2026Updated 5 months ago
- convert reads from repeated measures of same piece of DNA into spaced matricies for deep learners.☆14Apr 21, 2023Updated 3 years ago
- Joint structural variant and copy number variant caller for HiFi sequencing data☆82Nov 4, 2025Updated 11 months ago
- A very fast interval tree data structure☆137Feb 3, 2025Updated last year