databio / GenomicDistributionsLinks
Calculate and plot distributions of genomic ranges
β26Updated 6 months ago
Alternatives and similar repositories for GenomicDistributions
Users that are interested in GenomicDistributions are comparing it to the libraries listed below
Sorting:
- Interactive R package to quantify, analyse and visualise alternative splicingβ37Updated this week
- Isoform-level functional RNA-Seq analysis π§¬β33Updated last week
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq dataβ42Updated 3 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq dataβ26Updated 2 weeks ago
- Clonal and subclonal Copy Number Alteration quality check integrating somatic mutationβ22Updated 3 weeks ago
- deepStats: a stastitical toolbox for deeptools and genomic signalsβ34Updated 4 years ago
- ireadβ25Updated 4 years ago
- Transcript quantification import with automatic metadata detectionβ67Updated 2 weeks ago
- interactive plots for differential expression analysisβ34Updated 4 months ago
- A small R package to make sequencing read coverage plots in R.β39Updated 2 weeks ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.β29Updated last year
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.β19Updated 3 years ago
- Sigflow: Streamline Analysis Workflows for Mutational Signatures, https://github.com/ShixiangWang/sigflow/pkgs/container/sigflowβ29Updated last year
- Differential ATAC-seq toolkitβ27Updated last year
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.β34Updated 3 years ago
- DRAGEN Tumor/Normal workflow post-processingβ23Updated 2 years ago
- Create QC and summary reports for Alevin outputβ31Updated 3 months ago
- π An R package of RNA-seq workflowβ15Updated 3 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneitβ¦β38Updated last year
- Sashimi plots for RNA-seq data using detected transcriptsβ29Updated 7 months ago
- Methods for summarizing and visualizing multi-biosample functional genomic annotationsβ46Updated 7 months ago
- Assembly of RNA reads to determine the effect of a cancer mutation on protein sequenceβ25Updated last year
- Flexible Bayesian inference of mutational signaturesβ36Updated 2 years ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.β36Updated last year
- Differential expression and allelic analysis, nonparametric statisticsβ29Updated 9 months ago
- AnaLysis routines for ePigenomicS data - π« Bioconductor projectβ16Updated 2 years ago
- DriverPowerβ26Updated 9 months ago
- a set of NGS pipelinesβ24Updated this week
- simplified cellranger for long-read dataβ19Updated 2 months ago
- A set of tools to annotate VCF files with expression and readcount dataβ29Updated 7 months ago