databio / GenomicDistributionsLinks
Calculate and plot distributions of genomic ranges
☆26Updated 7 months ago
Alternatives and similar repositories for GenomicDistributions
Users that are interested in GenomicDistributions are comparing it to the libraries listed below
Sorting:
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- interactive plots for differential expression analysis☆34Updated 5 months ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Isoform-level functional RNA-Seq analysis 🧬☆35Updated 3 weeks ago
- DRAGEN Tumor/Normal workflow post-processing☆24Updated 2 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆41Updated last year
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last month
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 9 months ago
- Millefy: Genome browser-like visualization of single-cell RNA-seq dataset☆29Updated 5 years ago
- Assembly of RNA reads to determine the effect of a cancer mutation on protein sequence☆25Updated last year
- Differential ATAC-seq toolkit☆27Updated last year
- A small R package to make sequencing read coverage plots in R.☆40Updated last month
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆19Updated 3 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆29Updated 8 months ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆36Updated last year
- iread☆25Updated 4 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- Clonal and subclonal Copy Number Alteration quality check integrating somatic mutation☆24Updated 2 months ago
- Sigflow: Streamline Analysis Workflows for Mutational Signatures, https://github.com/ShixiangWang/sigflow/pkgs/container/sigflow☆29Updated last year
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.☆17Updated 3 years ago
- Bedfile perturbation tool☆17Updated 2 months ago
- DriverPower☆26Updated 10 months ago
- Builds a PEP from SRA or GEO accessions☆53Updated this week
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 3 years ago
- The Read Origin Protocol (ROP) is a computational protocol that aims to discover the source of all reads, including those originating fro…☆36Updated last year
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆19Updated 2 months ago
- Chromatin segmentation in R☆19Updated 7 years ago
- Flexible Bayesian inference of mutational signatures☆37Updated 2 years ago
- Paired Replicate Analysis of Allelic Differential Splicing Events☆12Updated 2 years ago