Alternatives and similar repositories for polars-bio

Users that are interested in polars-bio are comparing it to the libraries listed below

• vsbuffalo / granges
  A Rust library and command line tool for working with genomic ranges and their data.
  ☆101Updated last year
• fulcrumgenomics / fqtk
  Fast FASTQ sample demultiplexing in Rust.
  ☆62Updated last week
• noamteyssier / bedrs
  bedtools-like functionality for interval sets in rust
  ☆52Updated 9 months ago
• brentp / vcfexpress
  expressions on VCFs
  ☆85Updated last month
• ArcInstitute / xsra
  An efficient CLI to extract sequences from the SRA
  ☆101Updated this week
• manzt / pygv
  a minimal, scriptable genome browser for python
  ☆51Updated 5 months ago
• rhpvorderman / sequali
  Fast sequencing data quality metrics
  ☆26Updated last week
• dbikard / genomenotebook
  A genome browser in your Jupyter notebook
  ☆31Updated 3 weeks ago
• goodwright / nextflow.py
  Python wrapper around Nextflow.
  ☆59Updated last month
• jackh726 / bigtools
  A high-performance BigWig and BigBed library in Rust
  ☆90Updated last week
• vembrane / vembrane
  vembrane filters VCF records using python expressions
  ☆58Updated this week
• alignoth / alignoth
  Creating alignment plots from bam files
  ☆65Updated this week
• quinlan-lab / bedder-rs
  an API for intersections of genomic data
  ☆75Updated last week
• nf-core / variantbenchmarking
  Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research
  ☆29Updated 2 weeks ago
• bentsherman / nf-boost
  Experimental features for Nextflow
  ☆43Updated 2 months ago
• pachterlab / splitcode
  Flexible and efficient parsing, interpreting and editing of sequencing reads
  ☆43Updated this week
• mortazavilab / swan_vis
  A Python library to visualize and analyze long-read transcriptomes
  ☆62Updated last month
• nextflow-io / nf-validation
  Params validation plugin for Nextflow pipelines
  ☆48Updated 9 months ago
• fulcrumgenomics / fgpyo
  Quality of life improvements for Bioinformatics in Python.
  ☆29Updated this week
• jsh58 / NGmerge
  Merging paired-end reads and removing adapters
  ☆44Updated 2 months ago
• genepi / cloudgene3
  A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.
  ☆16Updated last month
• mrvollger / rustybam
  bioinformatics toolkit in rust
  ☆89Updated this week
• COMBINE-lab / oarfish
  long read RNA-seq quantification
  ☆85Updated last month
• Wytamma / snk
  Snakemake workflow management system and CLI generation tool
  ☆57Updated last month
• alejandrogzi / gtfsort
  a lexicographically-based GTF/GFF sorter
  ☆34Updated last month
• mrvollger / SmkTemplate
  A template repository for snakemake workflows.
  ☆38Updated 6 months ago
• OceanGenomics / mudskipper
  A tool for projecting genomic alignments to transcriptomic coordinates
  ☆36Updated last year
• Boehringer-Ingelheim / dso
  Data Science Operations (dso) command line tool
  ☆32Updated last month
• noamteyssier / gia
  gia: Genomic Interval Arithmetic
  ☆62Updated 9 months ago
• foerstner-lab / gffpandas
  Parse GFF3 into Pandas dataframes
  ☆27Updated last year