Alternatives and similar repositories for polars-bio

Users that are interested in polars-bio are comparing it to the libraries listed below

• vsbuffalo / granges
  A Rust library and command line tool for working with genomic ranges and their data.
  ☆100Updated last year
• fulcrumgenomics / fqtk
  Fast FASTQ sample demultiplexing in Rust.
  ☆66Updated last week
• noamteyssier / bedrs
  bedtools-like functionality for interval sets in rust
  ☆54Updated 2 months ago
• manzt / pygv
  a minimal, scriptable genome browser for python
  ☆51Updated 10 months ago
• jackh726 / bigtools
  A high-performance BigWig and BigBed library in Rust
  ☆104Updated last week
• brentp / vcfexpress
  expressions on VCFs
  ☆86Updated 6 months ago
• goodwright / nextflow.py
  Python wrapper around Nextflow.
  ☆60Updated 2 months ago
• quinlan-lab / bedder-rs
  an API for intersections of genomic data
  ☆74Updated this week
• igvteam / igv-notebook
  Module for embedding igv.js in an IPython notebook
  ☆79Updated 8 months ago
• rhpvorderman / sequali
  Fast sequencing data quality metrics
  ☆28Updated last month
• ArcInstitute / xsra
  An efficient CLI to extract sequences from the SRA
  ☆113Updated 3 months ago
• 10XGenomics / scan-rs
  Single-cell analysis methods in Rust
  ☆27Updated 4 months ago
• bentsherman / nf-boost
  Experimental features for Nextflow
  ☆45Updated 2 months ago
• sstadick / perbase
  Per-base per-nucleotide depth analysis
  ☆142Updated last month
• vembrane / vembrane
  vembrane filters VCF records using python expressions
  ☆65Updated last month
• pyranges / ruranges
  Rust Backend for PyRanges Operations. More featureful and much faster replacement for the NCLS library
  ☆13Updated last week
• mrvollger / rustybam
  bioinformatics toolkit in rust
  ☆92Updated last month
• genepi / cloudgene3
  A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.
  ☆16Updated last month
• nf-core / variantbenchmarking
  Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research
  ☆36Updated this week
• foerstner-lab / gffpandas
  Parse GFF3 into Pandas dataframes
  ☆30Updated last year
• OceanGenomics / mudskipper
  A tool for projecting genomic alignments to transcriptomic coordinates
  ☆36Updated last year
• mortazavilab / swan_vis
  A Python library to visualize and analyze long-read transcriptomes
  ☆63Updated 5 months ago
• refgenie / refgenie
  Reference genome resource manager
  ☆74Updated last year
• hms-dbmi / chromoscope
  Interactive multiscale visualization for structural variation in human genomes
  ☆70Updated last week
• zavolanlab / zarp
  The Zavolab Automated RNA-seq Pipeline
  ☆35Updated 3 months ago
• nextflow-io / nf-validation
  Params validation plugin for Nextflow pipelines
  ☆48Updated last year
• Wytamma / snk
  Snakemake workflow management system and CLI generation tool
  ☆61Updated last week
• omgenomics / bio-data-zoo
  Example genomics data for tool developers
  ☆116Updated last year
• panoptes-organization / panoptes
  Monitor computational workflows in real time
  ☆73Updated last year
• nf-core / oncoanalyser
  A comprehensive cancer DNA/RNA analysis and reporting pipeline
  ☆89Updated last week