Alternatives and similar repositories for polars-bio

Users that are interested in polars-bio are comparing it to the libraries listed below

• vsbuffalo / granges
  A Rust library and command line tool for working with genomic ranges and their data.
  ☆101Updated last year
• fulcrumgenomics / fqtk
  Fast FASTQ sample demultiplexing in Rust.
  ☆63Updated last month
• noamteyssier / bedrs
  bedtools-like functionality for interval sets in rust
  ☆52Updated 10 months ago
• manzt / pygv
  a minimal, scriptable genome browser for python
  ☆51Updated 6 months ago
• goodwright / nextflow.py
  Python wrapper around Nextflow.
  ☆59Updated last week
• brentp / vcfexpress
  expressions on VCFs
  ☆85Updated 2 months ago
• ArcInstitute / xsra
  An efficient CLI to extract sequences from the SRA
  ☆108Updated 3 weeks ago
• nf-core / variantbenchmarking
  Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research
  ☆31Updated last week
• igvteam / igv-notebook
  Module for embedding igv.js in an IPython notebook
  ☆76Updated 5 months ago
• foerstner-lab / gffpandas
  Parse GFF3 into Pandas dataframes
  ☆28Updated last year
• quinlan-lab / bedder-rs
  an API for intersections of genomic data
  ☆75Updated 3 weeks ago
• Kuanhao-Chao / splam
  ✂️ Deep learning-based splice site predictor that improves spliced alignments
  ☆53Updated 4 months ago
• vembrane / vembrane
  vembrane filters VCF records using python expressions
  ☆61Updated this week
• jackh726 / bigtools
  A high-performance BigWig and BigBed library in Rust
  ☆100Updated last month
• mortazavilab / swan_vis
  A Python library to visualize and analyze long-read transcriptomes
  ☆62Updated 2 months ago
• rhpvorderman / sequali
  Fast sequencing data quality metrics
  ☆26Updated last month
• nf-core / oncoanalyser
  A comprehensive cancer DNA/RNA analysis and reporting pipeline
  ☆76Updated this week
• refgenie / refgenie
  Reference genome resource manager
  ☆75Updated last year
• mribeirodantas / NextflowSnippets
  This repository hosts a large collection of Nextflow snippets
  ☆57Updated 5 months ago
• OceanGenomics / mudskipper
  A tool for projecting genomic alignments to transcriptomic coordinates
  ☆36Updated last year
• bentsherman / nf-boost
  Experimental features for Nextflow
  ☆43Updated 3 months ago
• genepi / cloudgene3
  A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.
  ☆16Updated 3 months ago
• fulcrumgenomics / python-snakemake-template
  A template repository for Snakemake pipepline(s) and a python command-line toolkit.
  ☆28Updated 2 months ago
• ygidtu / trackplot
  trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…
  ☆93Updated last month
• nextflow-io / nf-validation
  Params validation plugin for Nextflow pipelines
  ☆48Updated 11 months ago
• jordanlab / tagore
  The script presents a simple way to visualize features on human chromosome ideograms
  ☆42Updated 2 months ago
• zavolanlab / zarp
  The Zavolab Automated RNA-seq Pipeline
  ☆35Updated this week
• 10XGenomics / scan-rs
  Single-cell analysis methods in Rust
  ☆23Updated last month
• ulelab / ultraplex
  Ultra-fast 5' and 3' demultiplexer
  ☆27Updated last year
• jsh58 / NGmerge
  Merging paired-end reads and removing adapters
  ☆44Updated 4 months ago