An end-to-end processing pipeline that transforms multi-channel whole-slide images into single-cell data.
☆35Jul 27, 2026Updated 2 weeks ago
Alternatives and similar repositories for mcmicro
Users that are interested in mcmicro are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A pipeline for processing Molecular Cartography data from Resolve Bioscience (combinatorial FISH)☆13Updated this week
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆68Mar 14, 2024Updated 2 years ago
- Nextflow version of Sopa - spatial omics pipeline and analysis☆19Jul 28, 2026Updated 2 weeks ago
- Multiple-choice microscopy pipeline☆156Aug 3, 2026Updated last week
- A nextflow pipeline which integrates multiple omic data streams and performs coordinated analysis☆11Jul 29, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Read, create and write cutting data for the Leica LMD6 & LMD7 microscope. Build reproducible workflows to calibrate, import SVG files and…☆16Jul 15, 2026Updated 3 weeks ago
- Spatial Single-Cell Analysis Toolkit☆113Mar 11, 2026Updated 5 months ago
- Compendium of tools for the Imaging Platform☆16Jul 23, 2026Updated 3 weeks ago
- ☆37Oct 10, 2025Updated 10 months ago
- ☆38Jul 31, 2026Updated 2 weeks ago
- Framework for image and flow cytometry analysis☆33Mar 17, 2026Updated 4 months ago
- Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue image…☆58May 8, 2024Updated 2 years ago
- Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research☆51Updated this week
- A bioinformatics best-practice processing and quality control pipeline for Xenium and Artera data☆45Aug 7, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- UNDER CONSTRUCTION: A pipeline for Genome Wide Association Studies