crazyhottommy / bioinformatics-one-liners
Bioinformatics one liners from Ming Tang
☆481Updated 4 years ago
Alternatives and similar repositories for bioinformatics-one-liners:
Users that are interested in bioinformatics-one-liners are comparing it to the libraries listed below
- ☆386Updated 3 years ago
- python module to plot beautiful and highly customizable genome browser tracks☆797Updated 8 months ago
- Intro to ChIPseq using HPC☆300Updated 2 years ago
- A tool to find sequencing data and metadata from public databases.☆568Updated 7 months ago
- A repository for setting up a RNAseq workflow☆428Updated 7 years ago
- ChIP-seq analysis notes from Ming Tang☆781Updated 7 months ago
- ☆441Updated 4 years ago
- RNA-seq workflow using STAR and DESeq2☆339Updated 7 months ago
- ENCODE ATAC-seq pipeline☆407Updated 8 months ago
- Collections of library structure and sequence of popular single cell genomic methods☆453Updated 3 months ago
- Differential expression of RNA-seq data using the Negative Binomial☆380Updated 2 weeks ago
- Customizable workflows based on snakemake and python for the analysis of NGS data☆394Updated this week
- Tools to process and analyze deep sequencing data.☆705Updated this week
- Bioinformatics Workbook repository☆184Updated 2 weeks ago
- ☆192Updated this week
- Package for fetching metadata and downloading data from SRA/ENA/GEO☆325Updated last month
- RNAseq analysis notes from Ming Tang☆985Updated 3 years ago
- Application for making ENCODE Blacklists☆295Updated 3 years ago
- Bioinformatics code libraries and scripts☆519Updated last month
- Phylogenetic orthology inference for comparative genomics☆745Updated 5 months ago
- RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.☆994Updated this week
- Table of software for the analysis of single-cell RNA-seq data.☆316Updated this week
- Tools for handling Unique Molecular Identifiers in NGS data sets☆505Updated last month
- A grammar of graphics for comparative genomics☆656Updated last month
- Tutorials on phylogenetic and phylogenomic inference☆377Updated last year
- RSEM: accurate quantification of gene and isoform expression from RNA-Seq data☆431Updated last year
- Fast genome-wide functional annotation through orthology assignment☆597Updated 10 months ago
- This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster☆166Updated 4 years ago
- Differential analysis of RNA-Seq☆303Updated 8 months ago