crazyhottommy / bioinformatics-one-linersLinks
Bioinformatics one liners from Ming Tang
☆500Updated 5 years ago
Alternatives and similar repositories for bioinformatics-one-liners
Users that are interested in bioinformatics-one-liners are comparing it to the libraries listed below
Sorting:
- ☆407Updated 4 years ago
- A tool to find sequencing data and metadata from public databases.☆592Updated last year
- RNA-seq workflow using STAR and DESeq2☆351Updated 3 weeks ago
- ☆442Updated 5 years ago
- python module to plot beautiful and highly customizable genome browser tracks☆862Updated last year
- A curated and summarized list of bioinformatics bench-marking papers and resources.☆351Updated 2 months ago
- Differential expression of RNA-seq data using the Negative Binomial☆437Updated last month
- Customizable workflows based on snakemake and python for the analysis of NGS data☆396Updated this week
- GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more☆450Updated last year
- Intro to ChIPseq using HPC☆320Updated 2 years ago
- A list of useful bioinformatics resources☆622Updated 8 months ago
- Tools for handling Unique Molecular Identifiers in NGS data sets☆534Updated 6 months ago
- GTEx & TOPMed data production and analysis pipelines☆392Updated 4 months ago
- Tools to process and analyze deep sequencing data.☆751Updated 5 months ago
- A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS…☆536Updated 4 months ago
- RSEM: accurate quantification of gene and isoform expression from RNA-Seq data☆455Updated last year
- A repository for setting up a RNAseq workflow☆450Updated 8 years ago
- Package for fetching metadata and downloading data from SRA/ENA/GEO☆348Updated last month
- Short lessons from FAS Informatics coffee hour☆155Updated 2 years ago
- A collection of resources for learning about tools and programming languages related to Bioinformatics☆189Updated 3 years ago
- Collections of library structure and sequence of popular single cell genomic methods☆488Updated 7 months ago
- ChIP-seq analysis notes from Ming Tang☆836Updated last year
- A list of interesting genome browser and genome visualization programs☆1,041Updated 3 weeks ago
- Workshops presented by the Gladstone Bioinformatics Core☆242Updated this week
- ☆212Updated 5 months ago
- Differential analysis of RNA-Seq☆312Updated 7 months ago
- Materials for short, half-day workshops☆343Updated last month
- Phylogenetic orthology inference for comparative genomics☆821Updated 6 months ago
- Near-optimal RNA-Seq quantification☆713Updated last month
- Fast genome-wide functional annotation through orthology assignment☆687Updated 6 months ago