Bioinformatics one liners from Ming Tang
☆503Oct 4, 2020Updated 6 years ago
Alternatives and similar repositories for bioinformatics-one-liners
Users that are interested in bioinformatics-one-liners are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Unix, R and python tools for genomics and data science☆1,409Aug 25, 2025Updated last year
- Useful bash one-liners for bioinformatics.☆2,032Sep 9, 2023Updated 3 years ago
- RNAseq analysis notes from Ming Tang☆1,097Nov 15, 2021Updated 4 years ago
- ChIP-seq analysis notes from Ming Tang☆853Aug 5, 2024Updated 2 years ago
- Applied Computational Genomics Course at UU: Spring 2020☆1,132Apr 5, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- scRNAseq analysis notes from Ming Tang☆845Dec 2, 2024Updated last year
- A curated list of awesome Bioinformatics libraries and software.☆4,357Sep 27, 2026Updated last month
- a snakemake pipeline to process ChIP-seq files from GEO or in-house☆133Jan 1, 2026Updated 10 months ago
- A curated and summarized list of bioinformatics bench-marking papers and resources.☆368Feb 26, 2026Updated 8 months ago
- resources for learning bioinformatics☆1,699Jan 8, 2025Updated last year
- A curated list of resources for learning bioinformatics.☆527Aug 29, 2026Updated 2 months ago
- Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.☆395Oct 23, 2026Updated 2 weeks ago
- Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis inclu…☆1,436May 31, 2023Updated 3 years ago
- DNA sequencing analysis notes from Ming Tang☆150Mar 26, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A tool to find sequencing data and metadata from public databases.☆606Aug 13, 2024Updated 2 years ago
- Plot structural variant signals from many BAMs and CRAMs☆574Jul 13, 2024Updated 2 years ago
- snakemake workflow for post-processing scATACseq data☆23Jul 15, 2020Updated 6 years ago
- R/Bioconductor package for working with 10x scATACseq data☆44Nov 13, 2023Updated 2 years ago
- Customizable workflows based on snakemake and python for the analysis of NGS data☆404Updated this week
- Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.☆3,889Updated this week
- A list of useful bioinformatics resources☆643May 4, 2026Updated 6 months ago
- resources for faculty☆221Jan 8, 2023Updated 3 years ago
- karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome☆379Jul 6, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Collection of bioinformatics training materials☆1,159Nov 1, 2026Updated last week
- An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)☆2,461Oct 7, 2026Updated last month
- A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)☆147Aug 24, 2025Updated last year
- Short lessons from FAS Informatics coffee hour☆161Jul 6, 2023Updated 3 years ago
- RNAseq pipeline based on snakemake☆27Mar 8, 2023Updated 3 years ago
- A cross-platform and ultrafast toolkit for FASTA/Q file manipulation☆1,606Updated this week
- my notes for scATACseq analysis☆135Apr 24, 2024Updated 2 years ago
- ☆10Oct 21, 2019Updated 7 years ago
- ATAC-seq snakemake pipeline☆90Feb 13, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Bioinformatics code libraries and scripts☆579Jul 10, 2026Updated 3 months ago
- Package for fetching metadata and downloading data from SRA/ENA/GEO☆370Aug 16, 2026Updated 2 months ago
- fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing☆879Oct 29, 2026Updated last week
- A list of interesting genome browser and genome visualization programs☆1,113Oct 30, 2026Updated last week
- published papers with a lot of data☆76Apr 5, 2025Updated last year
- Aggregate results from bioinformatics analyses across many samples into a single report.☆1,499Oct 28, 2026Updated last week
- A grammar of graphics for comparative genomics☆792Oct 5, 2026Updated last month