Alternatives and similar repositories for cwltool

Users that are interested in cwltool are comparing it to the libraries listed below

• chanzuckerberg / miniwdl
  Workflow Description Language developer tools & local runner
  ☆199Updated last week
• dockstore / dockstore
  An app store for scientific workflows, tools, notebooks, and services
  ☆130Updated last week
• arvados / arvados
  An open source platform for managing and analyzing biomedical big data
  ☆412Updated this week
• ga4gh / workflow-execution-service-schemas
  The WES API is a standard way to run and manage portable workflows.
  ☆85Updated 3 weeks ago
• common-workflow-language / cwl-utils
  Python utilities for CWL
  ☆40Updated this week
• openwdl / wdl
  Specification for the Workflow Description Language (WDL).
  ☆839Updated last week
• bgruening / docker-galaxy
  Docker Images tracking the stable Galaxy releases.
  ☆234Updated 8 months ago
• ga4gh / task-execution-schemas
  ☆92Updated last month
• rabix / composer
  Visual and code editor for Common Workflow Language
  ☆309Updated 2 years ago
• Barski-lab / cwl-airflow
  Python package to extend Airflow functionality with CWL1.1 support
  ☆192Updated 2 years ago
• Mizzou-CBMI / COSMOS2
  Python Scientific Pipeline Management System
  ☆71Updated 2 years ago
• rabix / benten
  A language server for Common Workflow Language
  ☆66Updated last year
• galaxyproject / planemo
  Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training m…
  ☆96Updated 2 weeks ago
• yakneens / butler
  Butler is a framework for running scientific workflows on public and academic clouds.
  ☆69Updated 5 years ago
• elixir-cloud-aai / TESK
  GA4GH Task Execution Service Root Project + Deployment scripts on Kubernetes
  ☆43Updated 10 months ago
• NLeSC / scriptcwl
  Create cwl workflows by writing a simple Python script
  ☆40Updated 5 years ago
• galaxyproject / bioblend
  A Python library for interacting with the Galaxy API
  ☆95Updated last week
• yuch7 / cwlexec
  A new open source tool to run CWL workflows on LSF
  ☆37Updated 2 years ago
• hexylena / argparse2tool
  transparently build CWL and Galaxy XML tool definitions for any script that uses argparse
  ☆27Updated last year
• cgat-developers / ruffus
  CGAT-ruffus is a lightweight python module for running computational pipelines
  ☆175Updated 4 years ago
• ssadedin / bpipe
  Bpipe - a tool for running and managing bioinformatics pipelines
  ☆240Updated last week
• refinery-platform / refinery-platform
  The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. …
  ☆105Updated 2 years ago
• common-workflow-library / bio-cwl-tools
  CWL CommandLineTool descriptions for biology/life-sciences related applications
  ☆78Updated 7 months ago
• common-workflow-language / cwltest
  Framework for testing CWL tools and workflows
  ☆19Updated last week
• edamontology / edamontology
  EDAM is an ontology of data analysis and data management in bio- and other sciences, and science-based applications. It comprises concept…
  ☆132Updated last week
• ohsu-comp-bio / cwl-tes
  cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.
  ☆18Updated 2 years ago
• HumanCellAtlas / metadata-schema
  This repo is for the metadata schemas associated with the HCA
  ☆68Updated this week
• alpha-unito / streamflow
  StreamFlow Workflow Manager
  ☆61Updated this week
• elixir-cloud-aai / cwl-WES
  Trigger CWL workflows via GA4GH WES and TES
  ☆17Updated 3 weeks ago
• common-workflow-library / legacy
  Deprecated
  ☆100Updated 6 years ago