Common Workflow Language reference implementation
☆371May 16, 2026Updated this week
Alternatives and similar repositories for cwltool
Users that are interested in cwltool are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊☆1,480Jan 8, 2026Updated 4 months ago
- Python utilities for CWL☆42May 14, 2026Updated last week
- Deprecated☆101Aug 12, 2019Updated 6 years ago
- Released CWL v1.2.1 specification☆44Mar 21, 2026Updated 2 months ago
- A WDL, CWL and Python API supporting easy-to-use workflow engine. It is scalable, efficient and cross-platform (Linux/macOS).☆930May 14, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Import a CWL workflow specification to Nextflow script (experimental)☆27Aug 9, 2018Updated 7 years ago
- Framework for testing CWL tools and workflows☆20May 14, 2026Updated last week
- CWL CommandLineTool descriptions for biology/life-sciences related applications☆80Mar 25, 2025Updated last year
- A language server for Common Workflow Language☆64Dec 6, 2023Updated 2 years ago
- Visual and code editor for Common Workflow Language☆315Jan 11, 2023Updated 3 years ago
- Trigger the Google Genomics Pipeline API with CWL☆11Feb 7, 2017Updated 9 years ago
- Python package to extend Airflow functionality with CWL1.1 support☆194Oct 25, 2023Updated 2 years ago
- A web application to view and share Common Workflow Language workflows☆50May 13, 2026Updated last week
- [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0☆75Nov 18, 2020Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Profile for provenance research object of a CWL workflow run☆19Dec 20, 2022Updated 3 years ago
- [Historical] Reproducible Analyses for Bioinformatics☆106Mar 11, 2019Updated 7 years ago
- Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement☆29Jun 9, 2020Updated 5 years ago
- StreamFlow Workflow Manager☆63Updated this week
- Automated CWL and Galaxy XML generation for Python tools that use argparse and click☆11Jul 29, 2019Updated 6 years ago
- CWL experimental grammar☆11Nov 16, 2025Updated 6 months ago
- An open source platform for managing and analyzing biomedical big data☆418May 14, 2026Updated last week
- Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale product…☆1,064May 12, 2026Updated last week
- APIs for discovering genomics tools, their metadata and their containers☆35Mar 28, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆44Sep 17, 2023Updated 2 years ago
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆39Apr 13, 2026Updated last month
- Docker images of bioinformatics software☆21Jun 15, 2017Updated 8 years ago
- cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.☆19Mar 2, 2023Updated 3 years ago
- Create cwl workflows by writing a simple Python script☆40Apr 29, 2020Updated 6 years ago
- CWL on Kubernetes☆52Feb 4, 2026Updated 3 months ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆21Nov 7, 2022Updated 3 years ago
- Visualizer of CWL (Common Workflow Language) workflows for Vue☆30Dec 7, 2022Updated 3 years ago
- Patterns commonly encountered when writing CWL workflows☆26Mar 30, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A library for generating an interactive SVG visualization of CWL workflows☆78Aug 15, 2024Updated last year
- Import and run CWL workflows on DNAnexus (alpha)☆13Sep 12, 2018Updated 7 years ago
- Accumulating container resource usage with workflow metadata☆19Mar 17, 2021Updated 5 years ago
- Open workflow definitions for genomic analysis from MGI at WUSM.☆105Jun 23, 2025Updated 10 months ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Nov 17, 2021Updated 4 years ago
- Tools for bam file processing☆56Apr 20, 2015Updated 11 years ago
- Specification for the Workflow Description Language (WDL).☆850May 13, 2026Updated last week