Common Workflow Language reference implementation
β371Apr 26, 2026Updated this week
Alternatives and similar repositories for cwltool
Users that are interested in cwltool are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repository for the CWL standards. Use https://cwl.discourse.group/ for support πβ1,480Jan 8, 2026Updated 3 months ago
- Python utilities for CWLβ42Updated this week
- Deprecatedβ101Aug 12, 2019Updated 6 years ago
- Released CWL v1.2.1 specificationβ43Mar 21, 2026Updated last month
- A WDL, CWL and Python API supporting easy-to-use workflow engine. It is scalable, efficient and cross-platform (Linux/macOS).β929Apr 24, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Import a CWL workflow specification to Nextflow script (experimental)β27Aug 9, 2018Updated 7 years ago
- Framework for testing CWL tools and workflowsβ20Apr 22, 2026Updated last week
- CWL CommandLineTool descriptions for biology/life-sciences related applicationsβ80Mar 25, 2025Updated last year
- A language server for Common Workflow Languageβ66Dec 6, 2023Updated 2 years ago
- Visual and code editor for Common Workflow Languageβ314Jan 11, 2023Updated 3 years ago
- Trigger the Google Genomics Pipeline API with CWLβ11Feb 7, 2017Updated 9 years ago
- Python package to extend Airflow functionality with CWL1.1 supportβ194Oct 25, 2023Updated 2 years ago
- A web application to view and share Common Workflow Language workflowsβ50Apr 24, 2026Updated last week
- [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0β75Nov 18, 2020Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI β’ AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Profile for provenance research object of a CWL workflow runβ19Dec 20, 2022Updated 3 years ago
- [Historical] Reproducible Analyses for Bioinformaticsβ106Mar 11, 2019Updated 7 years ago
- Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirementβ29Jun 9, 2020Updated 5 years ago
- StreamFlow Workflow Managerβ63Updated this week
- Automated CWL and Galaxy XML generation for Python tools that use argparse and clickβ11Jul 29, 2019Updated 6 years ago
- An open source platform for managing and analyzing biomedical big dataβ417Updated this week
- CWL experimental grammarβ11Nov 16, 2025Updated 5 months ago
- Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale productβ¦β1,065Updated this week
- APIs for discovering genomics tools, their metadata and their containersβ35Mar 28, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform β’ AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflowsβ44Sep 17, 2023Updated 2 years ago
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflowsβ39Apr 13, 2026Updated 2 weeks ago
- Docker images of bioinformatics softwareβ21Jun 15, 2017Updated 8 years ago
- cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.β19Mar 2, 2023Updated 3 years ago
- Create cwl workflows by writing a simple Python scriptβ40Apr 29, 2020Updated 6 years ago
- CWL on Kubernetesβ52Feb 4, 2026Updated 2 months ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specificβ¦β21Nov 7, 2022Updated 3 years ago
- Visualizer of CWL (Common Workflow Language) workflows for Vueβ30Dec 7, 2022Updated 3 years ago
- Patterns commonly encountered when writing CWL workflowsβ26Mar 30, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A library for generating an interactive SVG visualization of CWL workflowsβ79Aug 15, 2024Updated last year
- Import and run CWL workflows on DNAnexus (alpha)β13Sep 12, 2018Updated 7 years ago
- Accumulating container resource usage with workflow metadataβ19Mar 17, 2021Updated 5 years ago
- Open workflow definitions for genomic analysis from MGI at WUSM.β104Jun 23, 2025Updated 10 months ago
- [Experimental] Workflow Definition Language (WDL) to CWLβ28Nov 17, 2021Updated 4 years ago
- Tools for bam file processingβ56Apr 20, 2015Updated 11 years ago
- Specification for the Workflow Description Language (WDL).β852Updated this week