☆82Feb 22, 2022Updated 4 years ago
Alternatives and similar repositories for dockerfiles
Users that are interested in dockerfiles are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Convert CWL to WDL☆17Oct 17, 2016Updated 9 years ago
- List of computational resources for analyzing microbial sequencing data.☆67Nov 18, 2025Updated 8 months ago
- "The who the what the huh?" is our pipeline for converting bcl files to fastq and performing QC.☆11Sep 19, 2022Updated 3 years ago
- Tools and software library developed by the ONT Applications group☆64Jan 22, 2021Updated 5 years ago
- An automated post sequencing data processing pipeline for Illumina HiSeq☆14Aug 28, 2025Updated 10 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Structural variant pipeline☆18Jun 25, 2020Updated 6 years ago
- Very very long reads, indeed☆13Apr 30, 2017Updated 9 years ago
- fork of dorado that supports S/BLOW5☆13May 29, 2026Updated last month
- Deprecated☆101Aug 12, 2019Updated 6 years ago
- Phasing reads with secondary alignments☆22Nov 30, 2024Updated last year
- A command line program for large scale buffering between piped programs☆17Nov 19, 2021Updated 4 years ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Nov 18, 2025Updated 8 months ago
- Set of tools to manipulate and visualize modified base bam files☆62Aug 2, 2022Updated 3 years ago
- Repository with all my container recipes 👩🍳☆17Sep 9, 2024Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Predict MLST directly from uncorrected long reads☆27Oct 31, 2025Updated 8 months ago
- ☆10May 17, 2017Updated 9 years ago
- CLI to automate Nextflow pipeline testing☆13Dec 15, 2025Updated 7 months ago
- Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are d…☆22Sep 24, 2018Updated 7 years ago
- Kmer Analysis of Pileups for Genotyping☆40Updated this week
- FlowCraft: a component-based pipeline composer for omics analysis using Nextflow.☆250Aug 10, 2025Updated 11 months ago
- [Bio in Docker] Symposium 2015☆21Sep 26, 2017Updated 8 years ago
- Hands-on workshop on NGS data analysis @ NARO☆11Oct 24, 2023Updated 2 years ago
- Catalogue of pairwise alignment algorithms and benchmarks☆26Jan 6, 2026Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Provides access to complex Bioinformatics software (even BioLinux!) in just one command.☆75Jun 28, 2017Updated 9 years ago
- Reducing reference bias using multiple population reference genomes☆34May 27, 2024Updated 2 years ago
- Demonstrating the PRoot program☆11Jul 29, 2016Updated 9 years ago
- ☆11Oct 21, 2016Updated 9 years ago
- ☆13Nov 18, 2024Updated last year
- ☆15Apr 2, 2025Updated last year
- FRAMA: From RNA-seq data to annotated mRNA assemblies☆12Sep 28, 2018Updated 7 years ago
- RNA mapping pipeline☆19Jun 3, 2018Updated 8 years ago
- Scripts to visualize the thumbnail images from illumina sequencing machines☆14Mar 16, 2016Updated 10 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Parallel Recipes : parallel workflow execution made easy☆13Sep 1, 2015Updated 10 years ago
- DeepMP is a computational tool to detect DNA modifications in Nanopore sequencing data☆27Mar 18, 2022Updated 4 years ago
- Kraken2 Server☆23Nov 24, 2025Updated 7 months ago
- VEP Plugin to annotate high-impact five prime UTR variants☆30Aug 23, 2024Updated last year
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Aug 10, 2025Updated 11 months ago
- Genome guided re-segmention and visualization for raw nanopore sequencing data.☆47Dec 20, 2018Updated 7 years ago
- file command's magic pattern file for bioinformatics☆21Nov 25, 2015Updated 10 years ago