☆82Feb 22, 2022Updated 4 years ago
Alternatives and similar repositories for dockerfiles
Users that are interested in dockerfiles are comparing it to the libraries listed below
Sorting:
- Convert CWL to WDL☆17Oct 17, 2016Updated 9 years ago
- List of computational resources for analyzing microbial sequencing data.☆67Nov 18, 2025Updated 4 months ago
- "The who the what the huh?" is our pipeline for converting bcl files to fastq and performing QC.☆11Sep 19, 2022Updated 3 years ago
- Tools and software library developed by the ONT Applications group☆64Jan 22, 2021Updated 5 years ago
- An automated post sequencing data processing pipeline for Illumina HiSeq☆14Aug 28, 2025Updated 6 months ago
- Structural variant pipeline☆18Jun 25, 2020Updated 5 years ago
- Very very long reads, indeed☆13Apr 30, 2017Updated 8 years ago
- Deprecated☆101Aug 12, 2019Updated 6 years ago
- fork of dorado that supports S/BLOW5☆12Jan 8, 2026Updated 2 months ago
- Phasing reads with secondary alignments☆22Nov 30, 2024Updated last year
- A command line program for large scale buffering between piped programs☆17Nov 19, 2021Updated 4 years ago
- Set of tools to manipulate and visualize modified base bam files☆59Aug 2, 2022Updated 3 years ago
- Repository with all my container recipes 👩🍳☆17Sep 9, 2024Updated last year
- ☆10May 17, 2017Updated 8 years ago
- CLI to automate Nextflow pipeline testing☆12Dec 15, 2025Updated 3 months ago
- [Bio in Docker] Symposium 2015☆21Sep 26, 2017Updated 8 years ago
- FlowCraft: a component-based pipeline composer for omics analysis using Nextflow.☆248Aug 10, 2025Updated 7 months ago
- Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are d…☆22Sep 24, 2018Updated 7 years ago
- Kmer Analysis of Pileups for Genotyping☆37Mar 6, 2026Updated 2 weeks ago
- Benchmarking pipeline for single-cell perturbation prediction tools☆30Jul 11, 2025Updated 8 months ago
- Scripts to visualize the thumbnail images from illumina sequencing machines☆14Mar 16, 2016Updated 10 years ago
- Predict MLST directly from uncorrected long reads☆27Oct 31, 2025Updated 4 months ago
- Provides access to complex Bioinformatics software (even BioLinux!) in just one command.☆75Jun 28, 2017Updated 8 years ago
- Catalogue of pairwise alignment algorithms and benchmarks☆25Jan 6, 2026Updated 2 months ago
- Reducing reference bias using multiple population reference genomes☆34May 27, 2024Updated last year
- ☆11Oct 21, 2016Updated 9 years ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Nov 18, 2025Updated 4 months ago
- Demonstrating the PRoot program☆11Jul 29, 2016Updated 9 years ago
- ☆15Apr 2, 2025Updated 11 months ago
- RNA mapping pipeline☆18Jun 3, 2018Updated 7 years ago
- Parallel Recipes : parallel workflow execution made easy☆13Sep 1, 2015Updated 10 years ago
- ☆12Nov 18, 2024Updated last year
- Hands-on workshop on NGS data analysis @ NARO☆11Oct 24, 2023Updated 2 years ago
- DeepMP is a computational tool to detect DNA modifications in Nanopore sequencing data☆27Mar 18, 2022Updated 4 years ago
- Kraken2 Server☆23Nov 24, 2025Updated 3 months ago
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Aug 10, 2025Updated 7 months ago
- VEP Plugin to annotate high-impact five prime UTR variants☆28Aug 23, 2024Updated last year
- A message queue for genomic surveillance☆20Oct 14, 2021Updated 4 years ago
- Data and analysis for NA12878 genome on nanopore☆405Nov 22, 2022Updated 3 years ago