Simple tokenised template system for SGE
☆10Mar 1, 2023Updated 3 years ago
Alternatives and similar repositories for qsubsec
Users that are interested in qsubsec are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- parse Grid Engine qstat job info list into a list of python dicts☆11May 19, 2022Updated 4 years ago
- Sample an approximate number of reads from a fastq file without reading the entire file☆11Jun 20, 2017Updated 9 years ago
- Infrastructure code to support DNA pipeline☆38May 5, 2015Updated 11 years ago
- Lightweight workflows in bioinformatics:☆24Nov 5, 2014Updated 11 years ago
- A collection of open source bioinformatics tools developed and used by Addgene.☆11Jun 25, 2026Updated 3 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- beRi "beri environments for R installations" is an R environment, R installation, and R package management system for R☆14Dec 23, 2025Updated 6 months ago
- Convert sequence IDs between ucsc/refseq/genbank☆17Aug 28, 2018Updated 7 years ago
- Alternative taxonomic consensus algorithms based on the NCBI taxonomy tree☆16May 29, 2024Updated 2 years ago
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Oct 29, 2018Updated 7 years ago
- An object store for scientific data☆52Mar 5, 2026Updated 4 months ago
- ☆11May 4, 2025Updated last year
- Public repository for the biodata resource inventory performed in 2022.☆11Nov 25, 2025Updated 7 months ago
- Tao Liu's open source libraries for bioinformatics (unstable, pre-alpha)☆26Mar 23, 2021Updated 5 years ago
- A pipeline to assess the quantification of transcripts.☆19Jun 6, 2022Updated 4 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆99Apr 9, 2023Updated 3 years ago
- Bridge CEA In-House Batch Environment gives a uniform way to access external Batch scheduling systems.☆16Apr 8, 2026Updated 3 months ago
- ☆11May 27, 2024Updated 2 years ago
- Stable, performant, automated browser testing for Ginkgo☆25Jul 2, 2026Updated 2 weeks ago
- Reference implementation of the DRMAAv2 C Language Binding☆24Apr 5, 2013Updated 13 years ago
- Gene Set Enrichment Analysis in Python☆11Oct 26, 2018Updated 7 years ago
- RDF triples import, export and PHP SPARQL endpoint for Semantic MediaWiki☆29Mar 28, 2025Updated last year
- ☆15May 16, 2019Updated 7 years ago
- A big data cluster management tool that creates and manages clusters of different technologies.☆21Apr 20, 2015Updated 11 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Utility program for extracting sequences from a fasta/fastq file☆35Dec 23, 2024Updated last year
- km : a software for RNA-seq investigation using k-mer decomposition☆11Apr 8, 2025Updated last year
- Text Analysis with Python☆12Updated this week
- Reproducible Phylogenomics☆22Jun 28, 2016Updated 10 years ago
- Manipulate genomic features and validate the syntax and reference sequence of your GFF3 files☆10Dec 26, 2022Updated 3 years ago
- A tool for running bioinformatics workflows locally or in the cloud.☆30Dec 13, 2019Updated 6 years ago
- A lightweight AI agent which reads and summarizes research papers for you.☆12Jun 1, 2025Updated last year
- Lightweight resources assembly algorithm☆19May 17, 2017Updated 9 years ago
- ☆11Jun 26, 2020Updated 6 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Estimate PTM hotspots in protein sequence alignments☆15Feb 6, 2019Updated 7 years ago
- Sync skills from Git repositories to local AI coding tools (Gemini CLI / Claude Code / Codex CLI ... )☆27Jan 23, 2026Updated 5 months ago
- Find CpG islands in genome☆11Mar 27, 2020Updated 6 years ago
- Finding putative exons and constructing splicegraphs using Trans-ABySS contigs☆11Nov 8, 2018Updated 7 years ago
- A novel pipeline framework to accelerate bioinformatics analysis☆31Oct 5, 2025Updated 9 months ago
- Novo&Stitch is a genome assembly reconciliation tool based on optical map.☆10Oct 21, 2019Updated 6 years ago
- Scripts and documentations on the MCSC decontamination method☆10Jun 13, 2023Updated 3 years ago