Alternatives and similar repositories for qsubsec

Users that are interested in qsubsec are comparing it to the libraries listed below

• yvdriess / precipes
  Parallel Recipes : parallel workflow execution made easy
  ☆13Updated 9 years ago
• sjackman / docker-bio
  Docker images of bioinformatics software
  ☆21Updated 7 years ago
• HpcGridRunner / HpcGridRunner
  source code for HpcGridRunner
  ☆17Updated 3 years ago
• karel-brinda / rnftools
  RNF framework for NGS: simulation of reads, evaluation of mappers, conversion of RNF-compliant data.
  ☆14Updated 6 years ago
• koelling / dnacol
  Color DNA/RNA bases in terminal output
  ☆21Updated 7 years ago
• iqbal-lab / cortex
  reference free variant assembly
  ☆33Updated last year
• your-highness / normR
  Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.
  ☆11Updated 3 years ago
• ocxtal / comb
  comb aligner -- a graphical nucleotide sequence alignment tool
  ☆9Updated 8 years ago
• Abdo-Lab / Tychus
  ☆9Updated 7 years ago
• incertae-sedis / smof
  Explore and analyze biological sequence data
  ☆16Updated 10 months ago
• gregorykucherov / spaced-seeds-for-metagenomics
  ☆14Updated 9 years ago
• PriceLab / snapr
  SNAPR: a bioinformatics pipeline for efficient and accurate RNA-seq alignment and analysis
  ☆25Updated 10 years ago
• nextflow-io / cwl2nxf
  Import a CWL workflow specification to Nextflow script (experimental)
  ☆27Updated 6 years ago
• poreathon / poreathon
  Pipeline for poreathon
  ☆14Updated 10 years ago
• epruesse / ymp
  Flexible omics pipeline
  ☆18Updated 2 weeks ago
• SciLifeLab / NGI-MethylSeq
  This pipeline has moved! Please see:
  ☆11Updated 7 years ago
• karel-brinda / smbl
  SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.
  ☆23Updated 7 years ago
• bjpop / rubra
  Infrastructure code to support DNA pipeline
  ☆38Updated 10 years ago
• DecodeGenetics / BamHash
  ☆37Updated 4 years ago
• datasnakes / beRi
  beRi "beri environments for R installations" is an R environment, R installation, and R package management system for R
  ☆14Updated 5 years ago
• wtsi-svi / ReadServer
  Using reference-free compressed data structures to analyse thousands of human genomes (1000 Genomes ReadServer)
  ☆14Updated 7 years ago
• mdshw5 / strandex
  Sample an approximate number of reads from a fastq file without reading the entire file
  ☆11Updated 7 years ago
• openvax / varlens
  commandline manipulation of genomic variants and NGS reads
  ☆19Updated 8 months ago
• mariokostelac / ra-integrate
  DNA assembler developed on FER (Croatia), RBI (Croatia) and GIS (Singapore)
  ☆18Updated 9 years ago
• nickloman / poredb
  ☆19Updated 8 years ago
• arq5x / piledriver
  Basic, no assumptions, multi-pileup
  ☆24Updated 11 years ago
• MonashBioinformaticsPlatform / RNAsik-pipe
  RNAsik - more than just a pipeline
  ☆13Updated last year
• medvedevgroup / varmatch
  robust matching of small variant datasets using flexible scoring schemes
  ☆10Updated 5 years ago
• dnanexus-archive / dx-cwl
  Import and run CWL workflows on DNAnexus (alpha)
  ☆13Updated 6 years ago
• bio-excel / bioexcel
  ☆13Updated 7 years ago