YaoLab-Bioinfo / binQTL
QTL mapping with binmap data
☆18Updated 5 years ago
Alternatives and similar repositories for binQTL:
Users that are interested in binQTL are comparing it to the libraries listed below
- Bulked-Segregant Analysis using vcf file with or without parents☆25Updated 4 months ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆16Updated last year
- ☆21Updated 6 years ago
- Perform GWAS with gemma in a simple pipeline☆26Updated 2 years ago
- R package for binmap☆13Updated last year
- Build haplotye and generate figures☆18Updated 3 years ago
- Pipelines and scripts for analysing RNA-seq，genome and other sequecing data.☆9Updated 5 years ago
- ☆16Updated 6 months ago
- ☆21Updated 2 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆35Updated last month
- Pipeline to perform the allele-specific expression analysis (based on the work by Skelly et al. 2011)☆11Updated 6 years ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 2 years ago
- ☆12Updated 4 years ago
- A haplotype analysis toolkit for natural variation study.☆30Updated last year
- A pipeline for isoseq☆23Updated 6 years ago
- ☆9Updated 4 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆16Updated 5 years ago
- A comprehensive collection of long inverted repeats in 424 eukaryotic genomes☆16Updated 3 years ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆28Updated 4 years ago
- The repository for codes developed to generated the Maize NC358 assemblies and analyses.☆11Updated 5 years ago
- repository for code used in analysis of open wild wheat consortium☆16Updated 3 years ago
- Easily construct the ML species tree with single-copy gene shared by different species.☆26Updated 6 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- Scripts for NGS processing☆17Updated 7 years ago
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆22Updated 7 years ago
- A repo contains historical and updated MTEC libraries.☆17Updated 5 years ago
- ☆21Updated 5 years ago
- ☆14Updated 3 years ago
- ☆24Updated 2 years ago