caulilin / QTG_Seq
☆20Updated 5 years ago
Related projects: ⓘ
- Bulked-Segregant Analysis using vcf file with or without parents☆23Updated 5 months ago
- scripts for the project of seven thaliana genomes assembly☆35Updated 3 years ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆17Updated 9 months ago
- Pipelines and scripts for analysing RNA-seq,genome and other sequecing data.☆9Updated 5 years ago
- A haplotype analysis toolkit for natural variation study.☆27Updated 11 months ago
- ☆21Updated 5 years ago
- ☆15Updated 4 months ago
- Calculate circos format data of GC content and GC skew from genome data.☆11Updated 9 years ago
- ☆21Updated last year
- Likelihood-based Selective Sweep Detection☆35Updated 11 months ago
- VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Format☆25Updated this week
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆38Updated 4 years ago
- Transposable element polymorphism identification☆32Updated 4 years ago
- Scripts to convert between file formats for various analyses☆14Updated last month
- A pipeline for isoseq☆23Updated 6 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆16Updated 5 years ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆28Updated 3 years ago
- read and analyse RepeatMasker output☆23Updated last year
- Pan-genome Construction and Population Structure Variation Calling pipeline☆33Updated last week
- A box of genomics tools☆21Updated 4 years ago
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆21Updated 7 years ago
- QTL mapping with binmap data☆16Updated 5 years ago
- Perform GWAS with gemma in a simple pipeline☆24Updated 2 years ago
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆32Updated last year
- Working on cotton resequencing☆11Updated 4 years ago
- A tool for performing collinearity-incorporating homology inference☆26Updated 11 months ago
- ☆14Updated 2 years ago
- ☆9Updated 8 years ago
- Codes for the lettuce resequencing project in 2020☆25Updated 3 years ago
- ☆12Updated 3 years ago