wegene-llc / radmixtureLinks
an R package for ancestry analysis
☆37Updated 6 years ago
Alternatives and similar repositories for radmixture
Users that are interested in radmixture are comparing it to the libraries listed below
Sorting:
- QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.☆32Updated 9 years ago
- Run Picard on BAM files and collate 90 metrics into one file.☆41Updated 7 years ago
- ☆78Updated 11 years ago
- The CHM1-NA12878 benchmark for single-sample SNP/INDEL calling from WGS Illumina data☆30Updated 7 years ago
- A tool for evaluating RNA seq mapping☆22Updated 5 years ago
- Tools for next-generation sequencing analysis☆88Updated 5 years ago
- Method for detecting STR expansions from short-read sequencing data☆63Updated 3 years ago
- Experimental EIGENSOFT performance improvements.☆22Updated 10 years ago
- Bring Your Own Bioinformatics☆27Updated 9 years ago
- Estimate damage in standard NGS library preparation. Incompatible with library preparation methods from which the imbalance is lost (such…☆53Updated 8 years ago
- Workflows for germline short variant discovery in WGS data. PairedEndSingleSampleWf has been superseded in Broad production by https://gi…☆55Updated 5 years ago
- Evaluation of phasing performance☆23Updated 7 years ago
- gnomAD browser pre-ASHG 2018☆33Updated 4 years ago
- An awk-like VCF parser☆56Updated last year
- Adapters for trimming☆30Updated 6 years ago
- Analysis from kallisto paper☆32Updated 9 years ago
- Maximum likelihood demultiplexing☆47Updated 3 months ago
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago
- Tools for bam file processing☆55Updated 10 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆54Updated 7 years ago
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆34Updated 7 years ago
- ☆40Updated 7 years ago
- Tools to handle reads sequenced with unique molecular identifiers (UMIs).☆30Updated 7 years ago
- Scripts for GWAS association and metaanalysis☆43Updated 4 years ago
- combining p-values using modified stouffer-liptak for spatially correlated results (probes)☆45Updated 3 years ago
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆49Updated 6 years ago
- Documenting usage and experience with bioinformatic tools☆40Updated 9 years ago
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆26Updated 2 years ago
- 10x Genomics Reads Simulator☆45Updated last year
- A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL. This version of the pipeline uses the Rubra/Ruffus framewor…☆34Updated 11 years ago