mfoll / BayeScanLinks
Detecting natural selection from population-based genetic data
☆28Updated 6 years ago
Alternatives and similar repositories for BayeScan
Users that are interested in BayeScan are comparing it to the libraries listed below
Sorting:
- Tutorial about R package PopGenome☆44Updated 6 years ago
- Automated de novo assembly of whole chloroplast genomes.☆47Updated last year
- A pipeline that accepts a VCF file to run through Admixture☆63Updated 11 months ago
- Methods for examining PCA locally along the genome.☆86Updated last year
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆76Updated 4 years ago
- SambaR: Snp datA Management and Basic Analyses in R☆32Updated last month
- Assessing confidence in introgression among four populations☆27Updated 4 years ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- Synteny Imager☆65Updated last month
- RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors☆36Updated 2 years ago
- Graph-aware Retrieval of Selective Sweeps☆22Updated last year
- Pipelines and tools for the processing of ancient and modern HTS data.☆47Updated 3 weeks ago
- Tools and Utilities for msmc and msmc2☆49Updated 4 months ago
- ☆33Updated 4 years ago
- Pinpoints the mutation favored by selection☆34Updated 4 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆59Updated 2 years ago
- findGSE is a tool for estimating size of (heterozygous diploid or homozygous) genomes by fitting k-mer frequencies iteratively with a ske…☆38Updated last year
- Infer demographic history with the Moran model☆50Updated 5 months ago
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆27Updated 7 years ago
- A statistical framework for ploidy estimation using NGS short-read data☆62Updated 7 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆43Updated 6 years ago
- ☆45Updated 8 years ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- Script for removing or counting invariant sites for the RAxML ascertainment bias corrections☆16Updated last year
- A shiny application to visualize MCscan result☆37Updated 3 years ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆68Updated last month
- Interim data for the Darwin Tree of Life Project☆33Updated 5 years ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆56Updated 5 months ago
- Accompanying repository for our publications on manual curation methods for Transposable Elements.☆21Updated last year
- GONE: Scripts, programs and an example data set☆47Updated 4 months ago