mfoll / BayeScanLinks
Detecting natural selection from population-based genetic data
☆28Updated 6 years ago
Alternatives and similar repositories for BayeScan
Users that are interested in BayeScan are comparing it to the libraries listed below
Sorting:
- Automated de novo assembly of whole chloroplast genomes.☆47Updated last year
- Tutorial about R package PopGenome☆43Updated 6 years ago
- Methods for examining PCA locally along the genome.☆87Updated last year
- A pipeline that accepts a VCF file to run through Admixture☆63Updated last year
- Pipelines and tools for the processing of ancient and modern HTS data.☆48Updated this week
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆44Updated 6 years ago
- Synteny Imager☆65Updated last month
- RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors☆36Updated 2 years ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆76Updated 4 years ago
- Population genetics analyses from NGS data☆26Updated 4 years ago
- Assessing confidence in introgression among four populations☆28Updated 4 years ago
- SambaR: Snp datA Management and Basic Analyses in R☆32Updated 3 months ago
- Infer demographic history with the Moran model☆51Updated 7 months ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆59Updated 2 years ago
- Quantifying Introgression via Branch Lengths☆56Updated 3 years ago
- GONE: Scripts, programs and an example data set☆50Updated 5 months ago
- Tools and Utilities for msmc and msmc2☆49Updated 5 months ago
- Tutorial on using popular tools for learning about population history☆53Updated 7 years ago
- ☆54Updated 7 months ago
- Interim data for the Darwin Tree of Life Project☆33Updated 5 years ago
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆28Updated 7 years ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆57Updated 6 months ago
- Estimate recombination rates from population genetic data☆71Updated 5 years ago
- ☆45Updated 9 years ago
- LDna: an R package to perform linkage disequilibrium network analysis☆31Updated last year
- Pinpoints the mutation favored by selection☆34Updated 4 years ago
- A set of functions to visualise genotypes based on a VCF☆87Updated 3 years ago
- kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.☆45Updated last year
- A statistical framework for ploidy estimation using NGS short-read data☆62Updated 7 years ago
- Scripts to calculate population genetics statistics☆55Updated 7 years ago