Alternatives and similar repositories for RgeneticMap:

Users that are interested in RgeneticMap are comparing it to the libraries listed below

• LAILAB-CAU / update-Mo17
  ☆24Updated last year
• dawelab / Ab10-Assembly
  B73Ab10 genome assembly methods
  ☆16Updated 3 years ago
• SunPengChuan / wgdi-example
  ☆16Updated 3 months ago
• wtsi-hpag / scanPAV
  Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.
  ☆29Updated 7 years ago
• weigelworld / pan-nlrome
  The GitHub repository for the A. thaliana pan-NLR'ome project.
  ☆16Updated 5 years ago
• schneebergerlab / GameteBinning
  ☆12Updated 4 years ago
• YaoZhou89 / WGSc
  ☆16Updated 3 years ago
• caasivfbioinfo / Bol_pangenome
  ☆14Updated last year
• XuewenWangUGA / GMATA
  Software GMATA for SSR mining, marker designing, genotyping, plot etc.
  ☆13Updated 8 months ago
• jkimlab / mySyntenyPortal
  A stand-alone application for constructing websites for visualizing and browsing synteny blocks
  ☆18Updated 4 years ago
• caulai / Mo17_genome_assembly
  ☆14Updated 5 years ago
• kcakdemir / HiCPlotter
  “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau
  ☆19Updated 4 years ago
• sanger-tol / yahs
  Yet another Hi-C scaffolding tool
  ☆19Updated 5 months ago
• pinbo / SNP_Primer_Pipeline
  ☆21Updated 2 years ago
• Nextomics / pipeline-for-isoseq
  A pipeline for isoseq
  ☆23Updated 6 years ago
• TcbfGroup / Tcbf
  A pipeline for identifying conserved topologically associating domain boundaries among multiple species.
  ☆14Updated 8 months ago
• noecochetel / North_American_Vitis_Pangenome
  Construct and Analyze the North American Vitis pangenome
  ☆22Updated last year
• Atvar2 / plotHicGenome
  The tools are used for displaying hic signal of genome
  ☆23Updated 4 years ago
• baduelp / public
  ☆16Updated 5 months ago
• aubombarely / GenoToolBox
  A box of genomics tools
  ☆21Updated 4 years ago
• jmsong2 / GenomeSyn
  We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …
  ☆25Updated 3 years ago
• Uauy-Lab / pangenome-haplotypes
  Scripts to do haplotype analysis on pan genomes.
  ☆21Updated 4 years ago
• yiliao1022 / LASTZ_SV_pipeline
  ☆16Updated 5 years ago
• yiliao1022 / Pepper3Dgenome
  ☆15Updated 2 years ago
• GouXiangJian / SSRMMD
  SSRMMD: A Rapid and Accurate Algorithm for Mining SSR Feature Loci and Candidate Polymorphic SSRs Based on Assembled Sequences.
  ☆14Updated 4 years ago
• NBISweden / TransposonPSI
  TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…
  ☆13Updated 4 years ago
• xinkaitong / 1k-pig-genomes
  Accurate haplotype construction and detection of selection signatures enabled by 889 high quality pig genome sequences
  ☆13Updated last year
• liu3zhenlab / homotools
  ☆27Updated 3 months ago
• GaoLei-bio / SV
  ☆14Updated 3 years ago
• WarrenLab / chicken-pangenome-paper
  Scripts used to perform analyses in Rice et al. (2023)
  ☆15Updated last year