caleblareau / singlecell_bloodtraitsView external linksLinks
Data/analysis repository for "Interrogation of human hematopoiesis..." paper
☆20Jul 9, 2019Updated 6 years ago
Alternatives and similar repositories for singlecell_bloodtraits
Users that are interested in singlecell_bloodtraits are comparing it to the libraries listed below
Sorting:
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆47Sep 1, 2023Updated 2 years ago
- West Coast Dream Team Whole Genome Bisulfite Sequencing☆15Nov 7, 2025Updated 3 months ago
- This repository contains HCA Benchmarking codes☆26Nov 11, 2019Updated 6 years ago
- ☆12Nov 9, 2020Updated 5 years ago
- 生命科学者のためのDr.Bonoデータ解析実践道場☆10Sep 19, 2019Updated 6 years ago
- HOT regions paper☆11Jun 18, 2019Updated 6 years ago
- Mean Alterations Using Discrete Expression☆14Apr 9, 2024Updated last year
- BPNet manuscript code.☆12Dec 1, 2020Updated 5 years ago
- <<------ Use SnapATAC!!☆26Mar 15, 2019Updated 6 years ago
- singleCellNet in Python☆15Jan 29, 2026Updated 2 weeks ago
- ☆12Dec 7, 2020Updated 5 years ago
- S3norm ver2 + IDEAS epigenetic state / master peak list☆12Sep 22, 2023Updated 2 years ago
- Code to accompany publication on cell free chromatin immunoprecipitation (cfChIP)☆13Jun 29, 2025Updated 7 months ago
- genomics toolbox that supports both graphical and command-line execution☆15Dec 3, 2024Updated last year
- ☆14May 26, 2020Updated 5 years ago
- C++ implementation of the SEM algorithm☆16Dec 18, 2024Updated last year
- Cell cycle analysis of single-cell proteomic and transcriptomic data for the FUCCI cell model☆14Oct 19, 2023Updated 2 years ago
- ☆14Jun 24, 2017Updated 8 years ago
- ☆20Jun 26, 2025Updated 7 months ago
- Scripts for processing sci-RNA-seq/sci-ATAC-seq/sci-CAR reads processing☆15Dec 12, 2018Updated 7 years ago
- Analysing Capture Seq Count Data☆13Jun 11, 2018Updated 7 years ago
- NGS Tutorial☆15Apr 22, 2017Updated 8 years ago
- Digenome-toolkit ver2.☆16Nov 1, 2021Updated 4 years ago
- Publication Page for Satpathy*, Granja* et al 2019☆95Apr 29, 2020Updated 5 years ago
- ATAC-seq processing pipeline☆34Apr 8, 2022Updated 3 years ago
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆37Sep 24, 2021Updated 4 years ago
- Empirical Bayes methods for single cell data☆16Oct 12, 2020Updated 5 years ago
- ☆16Jan 15, 2025Updated last year
- ☆18May 12, 2023Updated 2 years ago
- ORF Quantification pipeline for Alternative Splicing☆16May 11, 2021Updated 4 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆18Mar 5, 2019Updated 6 years ago
- Custom scripts for monotreme genome project☆19Jan 12, 2021Updated 5 years ago
- A preprocessing and QC pipeline for HiChIP data☆40Jul 11, 2022Updated 3 years ago
- ☆18Jun 3, 2020Updated 5 years ago
- ☆21Jul 25, 2023Updated 2 years ago
- Hi-C Interaction Frequency Inference (HIFI): High-resolution estimation of DNA-DNA interaction frequency from Hi-C data☆24Sep 28, 2022Updated 3 years ago
- R package of colors for the Buenrostro Lab☆86Aug 21, 2024Updated last year
- GenomeFlow: A Graphical Tool for Modeling and Analyzing 3D Genome Structure☆23Feb 21, 2019Updated 6 years ago
- ☆11Jul 3, 2022Updated 3 years ago