balabanmetin / uDance
☆43Updated 9 months ago
Alternatives and similar repositories for uDance:
Users that are interested in uDance are comparing it to the libraries listed below
- SHOOT.bio - the phylogenetic search engine☆24Updated last year
- SynTracker is a pipeline, designated to determine the biological relatedness of conspecific strains (microbial strains of the same specie…☆25Updated 2 months ago
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆27Updated last year
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆31Updated 2 years ago
- Tiberius is a deep learning gene finder.☆44Updated this week
- STAG: Species Tree from All Genes☆32Updated 6 years ago
- Pangenome analysis of eukaryotes.☆18Updated 4 years ago
- Improved Inference of Ortholog Groups using Hidden Markov Models☆28Updated 3 weeks ago
- Comparison pipeline for Prokaryote Protein Coding Gene Predictors☆22Updated 8 months ago
- Bacterial GWAS analysis☆34Updated last month
- IslandPath standalone software☆31Updated last year
- Gene-flank analysis tool☆26Updated last month
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 4 years ago
- Inferring bacterial recombination rates from large-scale sequencing datasets.☆42Updated last year
- 🍊 💫 Trim, circularise and orient long read bacterial genome assemblies☆26Updated 5 years ago
- MAG Circularization Method☆33Updated 2 years ago
- a broadly applicable tool for automated gene identification and retrieval☆30Updated last month
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆51Updated last month
- Python tool to reduce size and redundancy of phylogenetic datasets☆29Updated last year
- Correcting errors in noisy long reads using variation graphs☆51Updated 2 years ago
- A repository for the lessons and notebooks used for Binder tutorials☆13Updated 4 years ago
- ☆26Updated 3 years ago
- SCAPP is a plasmid assembly tool. This tool is described in our paper: https://microbiomejournal.biomedcentral.com/articles/10.1186/s4016…☆31Updated last year
- ☆32Updated 4 years ago
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆38Updated last month
- A comprehensive bacterial core gene-set annotation pipeline based on Roary and pairwise ILPs☆25Updated 2 months ago
- Genome-Genome circle synteny☆23Updated last year
- Improvement of metagenome-assembled genomes☆50Updated 4 years ago
- Microbial agile accurate SNP Typer☆29Updated last year
- Structural and functional annotation of eukaryotic metagenome-assembled genomes☆21Updated last year