noraracht / CONSULT
Accurate contamination removal using locality-sensitive hashing
☆14Updated last year
Alternatives and similar repositories for CONSULT:
Users that are interested in CONSULT are comparing it to the libraries listed below
- Correcting errors in noisy long reads using variation graphs☆51Updated 2 years ago
- Extract metagenome-assembled genomes (MAGs) from metagenomic data using Hi-C.☆23Updated last week
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆34Updated this week
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 4 years ago
- Improved Phased Assembler☆28Updated 2 years ago
- Strain-level haplotyping for metagenomes with short or long-reads.☆50Updated 7 months ago
- Quality control plotting for long reads☆10Updated 9 months ago
- Automated strain separation of low-complexity metagenomes☆51Updated 3 years ago
- BUSCOMP: BUSCO Compiler and Comparison tool☆21Updated 5 months ago
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆27Updated last year
- Scaffolding with Ultralong Reads☆15Updated 4 years ago
- assembly evaluation tool☆34Updated 2 years ago
- Colinear block visualisation tool☆30Updated last year
- A high performance tool to identify orthologs and paralogs across genomes.☆26Updated last year
- Full-length de novo viral haplotype reconstruction from noisy long reads☆17Updated last year
- reference-based long read assemblies of bacterial genomes☆47Updated 3 years ago
- Haplotype-aware genome assembly toolkit☆29Updated 5 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 4 years ago
- a tool to filter sites in a FASTA-format whole-genome pseudo-alignment☆56Updated last month
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆46Updated 4 years ago
- Haploidy and Size Completeness Estimation☆13Updated 10 months ago
- Nanomotif - a tool for identifying methylated motifs in metagenomic samples☆25Updated this week
- Microbial agile accurate SNP Typer☆29Updated last year
- STAG: Species Tree from All Genes☆33Updated 6 years ago
- Genome-Genome circle synteny☆23Updated last year
- Mash MinHash search your nucleotide sequences against a NCBI RefSeq genomes database☆41Updated 4 years ago
- Genome size estimation from long read overlaps☆49Updated 2 months ago
- Automatic evaluation of HGTs☆26Updated last month
- strain-level analysis tools☆34Updated 4 months ago
- Gene-flank analysis tool☆27Updated 2 months ago